Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq4003 176 5e-39 seq6755 98.7 1e-15 seq9516 87.8 2e-12 seq6550 82.4 8e-11 >seq4003 Length=18687 Score = 176 bits (194), Expect = 5e-39 Identities = 372/550 (68%), Gaps = 9/550 (2%) Strand=Plus/Plus Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAG 132954 ||||| || ||| ||||| |||||||| | | || | || ||| | ||||| Sbjct 12060 CAAGCGAAATCGGTGTGCAACCCCTCGTCACGGCTTATCAACTCATTGGAATAGGTCAAA 12119 Query 132955 CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAG 133014 |||||||||||||| | || |||| ||| || || | || || || |||||||| Sbjct 12120 CCGGGCATGAGGCCCCTCTTCTTGATCCAGAAAATTGACGCAAATGATCCAGAAAAGAAA 12179 Query 133015 ACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCG 133074 | ||||| || || |||||||| || || | ||| | || || | ||| | | Sbjct 12180 ATACCCTCAACAGCAGCGAAAGCGACGAGTCTCTCCGCAAAGGTTGACTCTCTATCAGAT 12239 Query 133075 ATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTC 133134 ||||| ||||| ||||| || ||||| ||||| || || || | || || ||| | Sbjct 12240 ATCCATCGCAGTGCCCAATCTGCCTTCCTTTTGATACATGGTATAGAATCCATAGCGGTA 12299 Query 133135 AACAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACA 133192 ||||| | |||| |||| || || | | ||||||||| || | ||||| Sbjct 12300 AACAAGCATTGTTTTTCTTGCG--GATCCTTAATGTAGGTGTCAATTAAAAGAGAATAGG 12357 Query 133193 TTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCA 133252 |||||||||| || || ||||| ||||| || || || ||||| || || ||| | | Sbjct 12358 TTTCCGAGTGCACATTTTCCATCATAATTTGGAATCCATAGAAGCATCGTGCTTCGGCTA 12417 Query 133253 CCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGG 133312 || ||||| | ||| || || ||||||||||||||||| ||||| ||| || | Sbjct 12418 TTTGGACTTCACATGAGAATCGTTCTACCAGATTTTCGTTGACAATGCCATCGGATGCTG 12477 Query 133313 CGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTC---CC 133369 | ||||| ||||| || | | ||||| ||| |||| | || ||||| || || Sbjct 12478 CAAAAAAAGCCAGGACTCGAGATAGGAAATAGCGTTCGTCCGCATTTAAGCGTTCAGACC 12537 Query 133370 AGTC-GCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCT 133428 | || || | || | || ||||| | |||||| | ||||| ||||| || | ||| Sbjct 12538 AATCTACGAG-ATCGTGAGAAAGGTCAATCTCCTCTGCAGTCCAGAACGAAGCTTGGGCC 12596 Query 133429 TTTTTGTACA 133438 || || |||| Sbjct 12597 TTCTTATACA 12606 >seq6755 Length=30522 Score = 98.7 bits (108), Expect = 1e-15 Identities = 69/79 (87%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 38356 CCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACG 38415 ||||||| ||||| || || | ||| ||||| |||||||| |||| ||||||||||||| Sbjct 24951 CCGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGACGGCCGCACCCTCAACG 24892 Query 38416 ACTACAACATCCAAAAGGA 38434 ||||||||||||||||||| Sbjct 24891 ACTACAACATCCAAAAGGA 24873 >seq9516 Length=56271 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || || || || || || || || || || || ||| | || || ||| | | Sbjct 47898 AATGCAGATTTTTGTCAAGACACTGACCGGAAAGACGATTACCCTTGAGGTGGAGTCTTC 47839 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | || | || || | ||||| ||||| ||||| |||||| Sbjct 47838 GGACACCATTGACAACG-TCAAGGCGAAGATTCAGGACAAGGAGGGCATTCCTCCCGACC 47780 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || |||| || ||||| || || || || | ||||| ||| ||||||| Sbjct 47779 AGCAGCGTCTAATTTTTGCTGGCAAGCAACTCGAAGATGGCCGCACGCTCTCTGACTACA 47720 Query 38422 ACATCCA-AAAGGAAGCGACGCTGCA 38446 ||||||| |||| ||| ||| |||| Sbjct 47719 ACATCCAGAAAGAGAGC-ACGTTGCA 47695 >seq6550 Length=14069 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || || ||||| || || | || || || || | Sbjct 9882 ATGCAGATCTTCGTTAAAACCCTGACAGGAAAAACGATAACTCTTGAGGTTGAATCCTCA 9941 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | |||| || || | || || || || ||||| | ||||| Sbjct 9942 GACACGATCGATAATGTCAAAGCGAAGATACAGGATAAGGAAGGCATTCCTCCGGACCAG 10001 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||||| || ||||| ||| |||| || | |||||||| || |||||| Sbjct 10002 CAGCGACTCATTTTTGCTGGCAAGCAGTTGGAGGATGGACGCACCCTTTCTGATTACAAC 10061 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| || || | || || || | || || ||| | | |||||| Sbjct 10062 ATCCAGAAAGAGTCTACTCTTCACCTCGTTCTTCGTCTTCGTGGCGGC 10109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500107840057600