Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq6550 107 1e-18 seq9516 105 4e-18 >seq6550 Length=14069 Score = 107 bits (118), Expect = 1e-18 Identities = 142/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||| ||||| || || |||||| | ||| |||| |||| ||| || || ||||| Sbjct 10072 TCTTTCTGGATGTTGTAATCAGAAAGGGTGCGTCCATCCTCCAACTGCTTGCCAGCAAAA 10013 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || ||||| |||||||| | || | || ||||| || |||||| |||||| || Sbjct 10012 ATGAGTCGCTGCTGGTCCGGAGGAATGCCTTCCTTATCCTGTATCTTCGCTTTGAC--AT 9955 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 ||||||| || || ||||| || | ||||| |||||||| || || || || Sbjct 9954 --TATCGATCGTGTCTGAGGATTCAACCTCAAGAGTTATCGTTTTTCCTGTCAGGGTTTT 9897 Query 34967 CACAAAGATCTGCAT 34981 || ||||||||||| Sbjct 9896 AACGAAGATCTGCAT 9882 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| |||||||| || || ||||| ||| | || |||| ||||| |||||||| ||||| Sbjct 9119 TTCCTTCTGAATATTGTAATCCGACAGGGTACGACCATCTTCCAGTTGTTTTCCAGCAAA 9060 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || |||||||| | || | || || ||||| ||| ||| || || | Sbjct 9059 GATGAGGCGCTGCTGGTCCGGTGGGATACCTTCTTTGTCCTGAATTTTCGCCTTCAC--A 9002 Query 34910 TGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965 | | ||||| ||| | ||| || || | || ||||| || ||||| || |||| Sbjct 9001 T--TGTCGATGGTGTCAGAAGACTCCACCTCCAGCGTGATGGTCTTGCCCGTAAGCGTCT 8944 Query 34966 TCACAAAGATCTGCAT 34981 ||||||| || ||||| Sbjct 8943 TCACAAAAATTTGCAT 8928 >seq9516 Length=56271 Score = 105 bits (116), Expect = 4e-18 Identities = 150/210 (71%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 34773 ACCAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 |||||| || | ||||| |||||||| ||||| ||||| || || | || |||| || Sbjct 47688 ACCAAGGTGCAACGTGCTCTCTTTCTGGATGTTGTAGTCAGAGAGCGTGCGGCCATCTTC 47747 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || || || || ||||| ||||| || |||||||| | || | ||||||||||| Sbjct 47748 GAGTTGCTTGCCAGCAAAAATTAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTG 47807 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||||||| |||||| | || | || | ||| || || | ||| || || || Sbjct 47808 AATCTTCGCCTTGACGTTGTCAATGGTGTCCGAAGACTCCACCTCAAGGGTAATCGTCTT 47867 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| || || ||||| ||||| |||||||| Sbjct 47868 TCCGGTCAGTGTCTTGACAAAAATCTGCAT 47897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324592492255920