Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq4003 190 2e-43 seq9433 82.4 9e-11 >seq4003 Length=18687 Score = 190 bits (210), Expect = 2e-43 Identities = 290/410 (71%), Gaps = 6/410 (1%) Strand=Plus/Plus Query 18982 CCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttt 19041 |||||||| | |||||||| ||||| ||| | || ||||| ||||| || || || || Sbjct 12081 CCCTCGTCACGGCTTATCAACTCATTGGAATAGGTCAAACCGGGCATGAGGCCCCTCTTC 12140 Query 19042 tttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAA 19101 || | |||||| || || |||||||||||||||||||| ||||| || || || || ||| Sbjct 12141 TTGATCCAGAAAATTGACGCAAATGATCCAGAAAAGAAAATACCCTCAACAGCAGCGAAA 12200 Query 19102 GCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCA 19161 || || ||||| || || | | | || ||| | |||||| |||||||||||| Sbjct 12201 GCGACGAGTCTCTCCGCAAAGGTTGACTCTCTATCAGATATCCATCGCAGTGCCCAATCT 12260 Query 19162 GCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATACATACGCTCATCT 19221 |||||| |||| | |||||| || | || |||| ||| | | ||| | | ||| Sbjct 12261 GCCTTCCTTTTGATACATGGTATAGAATCCATAGCGGTAA--ACAAGCAT-TGTTTTTCT 12317 Query 19222 ---GTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCT 19278 | ||| |||| || | || || || | | || |||| || || | |||||| Sbjct 12318 TGCGGATCCTTAATGTAGGTGTCAATTAAAAGAGAATAGGTTTCCGAGTGCACATTTTCC 12377 Query 19279 ATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAAT 19338 || || || ||||| || || |||| |||||| | ||| || ||||||| | ||| Sbjct 12378 ATCATAATTTGGAATCCATAGAAGCATCGTGCTTCGGCTATTTGGACTTCACATGAGAAT 12437 Query 19339 CTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGC 19388 | ||| |||| |||||| || || || ||||| ||||||||||| || Sbjct 12438 CGTTCTACCAGATTTTCGTTGACAATGCCATCGGATGCTGCAAAAAAAGC 12487 >seq9433 Length=11862 Score = 82.4 bits (90), Expect = 9e-11 Identities = 160/234 (68%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 48216 AATATATCTGGTATCCAAAGAGCTATAAATAA-ATCCCTAGTTCTTAGTTCTTCATTGCC 48274 |||| ||| || ||||| ||||| ||| | || ||| | | | | |||||| ||||| Sbjct 2427 AATAGATCAGGGATCCATAGAGC-ATAGAAAAGATCTCGCGCACGAACTTCTTCTTTGCC 2485 Query 48275 ACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATAT 48334 | ||| || | | |||||||| || | | ||||||||||| || || | ||| || Sbjct 2486 ATGGTTCTTTCTCAAGTCAAGAAATTCGAAAACGTCAGCATGCCACGGCTCAAGATAAAT 2545 Query 48335 TGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATA 48394 || | | |||| || || || || || || || || | ||||| || || || || Sbjct 2546 GGCGAATGCACCGGGCCGCTTGTTGCCACCCTGGTCAACATATCGTGCTGTGGCGTCGTA 2605 Query 48395 AACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATA 48448 | | |||||| || |||||||| || || ||||| ||||| | ||| || Sbjct 2606 TGCGCGTAACATGGGCACAATACCGTTGGAGTACCCATTTGTTCCGGCAATGTA 2659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562035796119600