Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq8369 100 2e-15 seq5882 100 2e-15 seq7229 98.7 8e-15 seq9516 93.3 3e-13 seq6550 91.5 1e-12 >seq8369 Length=46333 Score = 100 bits (110), Expect = 2e-15 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 552400 TATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAA 552459 ||||||| || ||||| ||||| || | | |||| || || | | ||| |||||| Sbjct 17163 TATTTTCAACTTATTCGGATAACCAGCCAGGTGTTCTCATCCAGGTGTATGAGGGAGAAC 17104 Query 552460 GAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTG 552519 | | ||| || ||||| ||| ||||| | || | ||| || || ||||| | Sbjct 17103 GTGCACGCACGAAGGATAACAATTTGCTTGGCAAGTTCGAATTATCGGGGATCCCTCCAG 17044 Query 552520 CTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGA 552579 | || || || || || ||||||||||| |||||||| || |||||||| || ||||||| Sbjct 17043 CGCCGCGCGGTGTTCCTCAAATTGAAGTCACTTTCGACATGGATGCCAACGGTATTTTGA 16984 Query 552580 ATGTGACTGC 552589 |||| |||| Sbjct 16983 ATGTCTCTGC 16974 Score = 91.5 bits (100), Expect = 1e-12 Identities = 98/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 550022 AGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAAC 550081 || |||||||||||||||||||||| | ||||| ||||| ||||| ||||| || || Sbjct 18740 AGATGTGTTGGTGTTTGGCAAAATGATCGCGTTGAGATTATCGCCAACGATCAGGGCAAT 18681 Query 550082 AGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCA 550141 | || |||||||||||||| | || | || || |||| | | | ||||| || || Sbjct 18680 CGCACAACTCCATCTTATGTCGCCTTTAGCGACACGGAACGTCTGATCGGTGACGCCGCT 18621 Query 550142 AAATATCAAG 550151 ||| | |||| Sbjct 18620 AAAAACCAAG 18611 >seq5882 Length=12852 Score = 100 bits (110), Expect = 2e-15 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCT 550471 || || |||||||| ||||||||||| || | ||||| || || ||||| ||| || Sbjct 4557 GTCCCGGCATATTTCAATGACTCACAGCGCCTCGCTACGAAGGACGCTGGTGCCATTTCT 4498 Query 550472 GGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTT 550531 || ||| ||||||| ||||||||||||||||| ||||| || || |||| || || || Sbjct 4497 GGTCTTGATGTTCTGCGTATTATCAATGAACCCACTGCCGCCGCCATTGCTTACGGTCTA 4438 Query 550532 GAT 550534 ||| Sbjct 4437 GAT 4435 >seq7229 Length=24319 Score = 98.7 bits (108), Expect = 8e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || |||||||| || |||||||| | || || ||||| || || |||||||| | || Sbjct 9366 ACCGTACCAGCGTACTTTAATGATGCTCAGCGGCAAGCAACGAAGGATGCTGGTCAAGTT 9307 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| | ||||||||||| | ||||| ||||||||||| ||||| || || || || Sbjct 9306 GCTGGTATCGATGTTCTTCGTGTCATCAACGAACCTACTGCCGCTGCCCTGGCCTACGGT 9247 Query 550529 CTTGATAAA 550537 || || ||| Sbjct 9246 CTCGACAAA 9238 >seq9516 Length=56271 Score = 93.3 bits (102), Expect = 3e-13 Identities = 104/137 (76%), Gaps = 4/137 (3%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314 ||||| | ||||||||||| || ||| ||||| ||||| ||||| | ||||||| Sbjct 47908 AGACGTAAGACAAGATGAAGAGTTGACTCCTTTTGG--ATATTATAATCCGAGAGAGTTC 47965 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 ||||||||||||||| ||||||||||| || | ||| |||||||| || || | | Sbjct 47966 GACCATCTTCAAGTTGTTTGCCGGCAAAAATGAGACGTTGTTGATCAGGGGGGATACTAT 48025 Query 563375 CTTTATCTTGAATTTTT 563391 | || | |||| ||||| Sbjct 48026 CGTTCTATTGAGTTTTT 48042 >seq6550 Length=14069 Score = 91.5 bits (100), Expect = 1e-12 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || || ||||| ||| ||||| || |||||||||| || || | | Sbjct 10099 AGACGAAGAACGAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGAAAGGGTGCGT 10040 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||| || | || || || |||||||| |||| ||||| || |||||||| ||||| Sbjct 10039 CCATCCTCCAACTGCTTGCCAGCAAAAATGAGTCGCTGCTGGTCCGGAGGAATGCCTTCC 9980 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACAT-TCGAGAGT 563435 ||||| || || || ||| || || || || || | | || | | || ||||| Sbjct 9979 TTATCCTGTATCTTCGCTTTGACATTATCGATCGTGTCTGAG-GATTCAACCTCAAGAGT 9921 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | ||||| || || || ||||||||||| || ||||| Sbjct 9920 TATCGTTTTTCCTGTCAGGGTTTTAACGAAGATCTGCAT 9882 Score = 86.0 bits (94), Expect = 5e-11 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 || || || || ||||| || || ||| || |||||||||||| | || || | Sbjct 9145 AGGCGAAGGACGAGATGGAGAGTGGATTCCTTCTGAATATTGTAATCCGACAGGGTACGA 9086 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| ||||||||||| ||||| || || | ||||| || || || || |||||| Sbjct 9085 CCATCTTCCAGTTGTTTTCCAGCAAAGATGAGGCGCTGCTGGTCCGGTGGGATACCTTCT 9026 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435 || || |||||||| || || || || || |||| || | || || || || Sbjct 9025 TTGTCCTGAATTTTCGCCTTCACATTGTCGATGGTGTCAG-AAGACTCCACCTCCAGCGT 8967 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || || ||||| || || || ||||||||||| Sbjct 8966 GATGGTCTTGCCCGTAAGCGTCTTCACAAAAATTTGCAT 8928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028746529941100