Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq4003 138 1e-27 >seq4003 Length=18687 Score = 138 bits (152), Expect = 1e-27 Identities = 296/437 (68%), Gaps = 4/437 (1%) Strand=Plus/Plus Query 37175 ACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAA 37234 ||| || ||||| || || || || || | |||||||| ||||| ||| |||| || Sbjct 12059 ACAAGCGAAATCGGTGTGCAACCCCTCGTCACGGCTTATCAACTCATTGGAATAGGTCAA 12118 Query 37235 TCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAA 37294 || ||||| | || || || || ||||| || |||| ||||| |||||||||||||| Sbjct 12119 ACCGGGCATGAGGCCCCTCTTCTTGATCCAGAAAATTGACGCAAATGATCCAGAAAAGAA 12178 Query 37295 AATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTAT-AATCAG 37353 |||||| ||||| || || || || || || | | | | |||| | ||| | ||||| Sbjct 12179 AATACCCTCAACAGCAGCGAAAGCGACGAGTC-TCTCCGCAAAGGTTGACTCTCTATCAG 12237 Query 37354 AAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTT 37413 | |||||| || |||||||||||| ||| | |||| || | || || || Sbjct 12238 ATATCCATCGCAGTGCCCAATCTGCCTTCCTTTTGATACATGGTATAGAATCCATAGCGG 12297 Query 37414 TTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACA 37473 | || | | | |||||||| ||| | || || || ||||||| | | ||| Sbjct 12298 TAAACAAGCATTGTTTTTCTTGCGGATCCTTAATGTAGGTGTCAATTAAAAGAGAATAGG 12357 Query 37474 TTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATA 37533 |||| ||||| | |||||| || || || || ||||| || || | ||||| | || Sbjct 12358 TTTCCGAGTGCACATTTTCCATCATAATTTGGAATCCATAGAAGCATCGTGCTTCGGCTA 12417 Query 37534 ATTGAACATC-GTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCT 37592 ||| || || | | || | | || | | ||||| || || || ||||| ||| Sbjct 12418 TTTGGACTTCACATGAGAATCGTTCTA-CCAGATTTTCGTTGACAATGCCATCGGATGCT 12476 Query 37593 GCAAAGAAAGCAAGAAC 37609 ||||| ||||| || || Sbjct 12477 GCAAAAAAAGCCAGGAC 12493 Score = 131 bits (144), Expect = 2e-25 Identities = 278/415 (67%), Gaps = 0/415 (0%) Strand=Plus/Minus Query 37218 TCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCA 37277 || || || || || || |||||||| | || ||||| || | ||| || || | ||| Sbjct 14147 TCGTTTGAGAACGTCAAGCCTGGCATAAGCCCCCTTTTCTTGAGCCAGAAGATAGACGCA 14088 Query 37278 AAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAA 37337 || || ||||| |||||||| ||||||||||| || ||||| || | ||| | | || Sbjct 14087 AACGAGCCAGAGAAGAAAATGCCTTCAACTGCAGCGAATGCCACCAAGCGTTCAGCAAAT 14028 Query 37338 GTTGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCA 37397 ||||| | ||||| |||||| || | |||||| ||||| || | ||| Sbjct 14027 GTTGATTGTTGGTCAGAGATCCATCTTAACGCCCAATCCGCCTTCTTCTTGATACAGGGT 13968 Query 37398 ATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCA 37457 || || || || || | |||||||| | || | ||| |||| || ||||| Sbjct 13967 ATAGTGTCGATAGCATCGAAGAGAAATTCACGTTGGCGAGAATCCTTTATGTAGGTATCG 13908 Query 37458 ATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAA 37517 || || | ||| |||| || || || ||||| || ||| || ||||| || || Sbjct 13907 ATAAGGAGGGAATATGTTTCTGAATGGATGTTTTCCATCATTATTTGGAAACCGTAGAAG 13848 Query 37518 CACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACT 37577 || | ||||| | | ||| || |||||| |||| | || | | || || || || Sbjct 13847 CAGCGCGCTTCGGCAACTTGTACCTCGTTAGAAAATCGCTCTACGAGATTCTCGTTGACA 13788 Query 37578 ATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCAT 37632 || ||||| ||| |||||||| || ||||| | | ||| || || | ||||| Sbjct 13787 ATGCCATCGGAAGCAGCAAAGAACGCCAGAACGTGTGATATGAAGTGGCGTTCAT 13733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592239872855600