Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq6550 113 3e-20 seq9516 105 5e-18 >seq6550 Length=14069 Score = 113 bits (124), Expect = 3e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 |||||| || || ||||||||||| || | || | || ||||||||||| || ||||| Sbjct 10073 CTCTTTCTGGATGTTGTAATCAGAAAGGGTGCGTCCATCCTCCAACTGCTTGCCAGCAAA 10014 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 || |||||||| || |||| |||| ||| ||||| || ||||| ||| ||| Sbjct 10013 AATGAGTCGCTGCTGGTCCGGAGGAATGCCTTCCTTATCCTGTATCTTCGCTTTGACATT 9954 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | | ||||| | || ||||| | || ||||||||||| |||| ||||| || Sbjct 9953 ATCGATCGTGTCTGAGGATTCAACCTCAAGAGTTATCGTTTTTCCTGTCAGGGTTTTAAC 9894 Query 48755 AAAAATCTGCAT 48766 || |||||||| Sbjct 9893 GAAGATCTGCAT 9882 Score = 82.4 bits (90), Expect = 6e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| ||| | ||| ||||| || ||||| ||||||||||| ||| | || | || ||| Sbjct 8908 ACCAGATGCAACGTACTCTCCTTCTGAATGTTGTAATCAGAAAGAGTACGTCCATCCTCC 8849 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATC 48652 ||||| || || ||||| || || ||||||||||| Sbjct 8848 AACTGTTTCCCCGCAAAGATGAGGCGCTGTTGATC 8814 >seq9516 Length=56271 Score = 105 bits (116), Expect = 5e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 48569 CGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACC 48628 |||||||||||| || || ||||| ||||| || | || | || || | ||||| || Sbjct 47700 CGTGCTCTCTTTCTGGATGTTGTAGTCAGAGAGCGTGCGGCCATCTTCGAGTTGCTTGCC 47759 Query 48629 GGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTT 48688 ||||| || || ||||| || || | |||| |||||||||||| |||||| || Sbjct 47760 AGCAAAAATTAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTCGCCTT 47819 Query 48689 TACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGT 48748 || | | | || || | ||||||||| | |||||||| ||||| |||| || Sbjct 47820 GACGTTGTCAATGGTGTCCGAAGACTCCACCTCAAGGGTAATCGTCTTTCCGGTCAGTGT 47879 Query 48749 TTTTACAAAAATCTGCAT 48766 || |||||||||||||| Sbjct 47880 CTTGACAAAAATCTGCAT 47897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380889362585970