Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq4003 145 1e-29 seq9433 91.5 3e-13 >seq4003 Length=18687 Score = 145 bits (160), Expect = 1e-29 Identities = 380/567 (67%), Gaps = 21/567 (4%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 |||||| ||||||||||||| || || ||| |||||| || |||||||| || || Sbjct 13633 ATATGGCAGATGTACAAGAAAGCCGAAGCCTCTTTCTGGACGGCAGAAGAGATGGACCTC 13692 Query 25537 GCCAAGGACATGGACGGCTGGT----ACGCTCTATCCAAAGAC---GAGCAGCATTT--T 25587 | |||||| | | | |||| |||| || ||| ||| || | || || | Sbjct 13693 TCTAAGGACCTTCATGACTGGACCAAACGC-CT---CAACGACAATGAACGCCACTTCAT 13748 Query 25588 CTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGC 25647 ||| |||| |||| |||||||| || || ||||| || || ||||||||||| Sbjct 13749 ATCAC--ACGTTCTGGCGTTCTTTGCTGCTTCCGATGGCATTGTCAACGAGAATCTCGTA 13806 Query 25648 GAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATG 25707 ||| |||| | | || || || | || || || |||||||||||||| || Sbjct 13807 GAGCGATTTTCTAACGAGGTACAAGTTGCCGAAGCGCGCTGCTTCTACGGTTTCCAAATA 13866 Query 25708 GCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCT-GATGACGTACATTACAGA 25766 || ||||| | || || || ||| || ||| | ||| || ||||| | || Sbjct 13867 ATGATGGAAAACATCCATTCAGAAACATATTCCCTCCTTATCGAT-ACCTACATAAAGGA 13925 Query 25767 CG-TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCAC-ATACCCAGCATCAAGAGG 25824 ||||| | | || || || | ||| ||||| ||| |||||| | ||||||| | Sbjct 13926 TTCTCGCCAAC-GTGAATTTCTCTTCGATGCTATCGA-CACTATACCCTGTATCAAGAAG 13983 Query 25825 AAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTG 25884 |||||| ||||| | | |||||| ||| | || |||| || || || Sbjct 13984 AAGGCGGATTGGGCGTTAAGATGGATCTCTGACCAACAATCAACATTTGCTGAACGCTTG 14043 Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944 || || || ||||| || || ||||| || ||| || ||||||||| | ||||||||| Sbjct 14044 GTGGCATTCGCTGCAGTTGAAGGCATTTTCTTCTCTGGCTCGTTTGCGTCTATCTTCTGG 14103 Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004 |||||| | | |||| ||||| || || || || ||||||||||| | | ||| Sbjct 14104 CTCAAGAAAAGGGGGCTTATGCCAGGCTTGACGTTCTCAAACGAGCTCATTTCCCGCGAC 14163 Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGC 26031 ||||| | |||| |||||| || ||| Sbjct 14164 GAGGGCATGCACACAGATTTCGCGTGC 14190 >seq9433 Length=11862 Score = 91.5 bits (100), Expect = 3e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 222044 AAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCG 222103 || || || |||||||| || || | || ||||||| | || || || ||| Sbjct 2427 AATAGATCAGGGATCCATAGAGCATAGAAAAGATCTCGCGCACGAACTTCTTCTTTGCCA 2486 Query 222104 TTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACG 222163 | ||| || |||| || | ||| || |||| |||||| ||||||||||| ||||| | | Sbjct 2487 TGGTTCTTTCTCAAGTCAAGAAATTCGAAAACGTCAGCATGCCACGGCTCAAGATAAATG 2546 Query 222164 GCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC 222201 || | || ||||| ||||||||||||||||| || || Sbjct 2547 GCGAATGCACCGGGCCGCTTGTTGCCACCCTGGTCAAC 2584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928724166281600