Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq4003 114 2e-20 seq6460 84.2 3e-11 >seq4003 Length=18687 Score = 114 bits (126), Expect = 2e-20 Identities = 340/512 (66%), Gaps = 27/512 (5%) Strand=Plus/Plus Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGA--AGAC-CCTGAAT 64770 ||||| || ||||| | || | || || || ||| | ||||||| | || ||| || Sbjct 13669 TGGACGGCAGAAGAGATGGACCTCTCTAAGGACCTTCATGACTGGACCAAACGCCTCAAC 13728 Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830 || |||||| | |||||| || | ||||| |||||||||| |||||||| ||| Sbjct 13729 GACAATGAACGCCACTTCATATCACACGTTCTGGCGTTCTTTGCTGCTTCCGATGGCATT 13788 Query 64831 GTTTTTGAGAATATCA-ATAACAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTC 64889 || |||||| || | | | ||||| | | || || || | ||||||||||| Sbjct 13789 GTCAACGAGAATCTCGTAGAGCGATTTT-CTAACGAGGTACAAGTTGCCGAAGCGCGCTG 13847 Query 64890 ATTCTACGCATATCAATGCCATAATGA----AATGGTTCATGGCGAAACATATTCAAAAT 64945 ||||||| | ||| ||||||| || | ||| ||||||||||| Sbjct 13848 CTTCTACGGTTTCCAA----ATAATGATGGAAAACATCCATTCAGAAACATATTCCCTCC 13903 Query 64946 TGATTGACAAATACATTAAGGATGGATCT-GAAAAGAAGCAGTTATTT--GAAGCCATCC 65002 | || || | ||||| |||||| ||| | || | | || | | || || ||| Sbjct 13904 TTATCGATACCTACATAAAGGAT---TCTCGCCAACGTGAATTTCTCTTCGATGCTATCG 13960 Query 65003 AAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGG---TTTGACACAA 65059 | ||| |||| ||||| ||||||||||| | ||||| | | |||| | |||| | Sbjct 13961 ACACTATACCCTGTATCAAGAAGAAGGCGGATTGGGCGTTAAGATGGATCTCTGACCAAC 14020 Query 65060 AGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCT 65119 | || | || || || ||| | | || || || || || || || ||||||| Sbjct 14021 AATC---AACATTTGCTGAACGCTTGGTGGCATTCGCTGCAGTTGAAGGCATTTTCTTCT 14077 Query 65120 CCGGGTCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGC 65178 | || || || |||| |||| | ||| | ||||| |||| || ||||||||| | Sbjct 14078 CTGGCTCGTT-TGCGTCTATCTTCTGGCTCAAGAAAAGGGGGCTTATGCCAGGCTTGACG 14136 Query 65179 TTCTCAAATGAACTTATTTCCCGAGATGAGGG 65210 |||||||| || || |||||||| || ||||| Sbjct 14137 TTCTCAAACGAGCTCATTTCCCGCGACGAGGG 14168 Score = 91.5 bits (100), Expect = 2e-13 Identities = 253/379 (67%), Gaps = 12/379 (3%) Strand=Plus/Minus Query 64799 TCCTGGCATTCTTTGCTGGGTCCGATGGAATTGTTTTTGAGAATATCA-ATAACAATTTT 64857 ||||||| || ||||| | |||||||| ||||| || ||| | | ||| ||| | Sbjct 12492 TCCTGGCTTTTTTTGCAGCATCCGATGGCATTGTCAACGAAAATCTGGTAGAACGATTCT 12433 Query 64858 GCGGATGAAGTGCAGATAAGCGAAGCGCGCTCATTCTACGCATATCAATGCCATAATG-A 64916 | |||||| || ||| |||||| || | ||||| | || ||| || ||| | Sbjct 12432 CATG-TGAAGTCCAAATAGCCGAAGCACGATGCTTCTATGGATTCCAAATT-ATGATGGA 12375 Query 64917 AATGGTTCATGGCGAAACATATTCAAAATTGATTGACAAATACATTAAGGATGGATCTGA 64976 || || || ||||| ||||| || ||||||| |||||||||||| || Sbjct 12374 AAATGTGCACTCGGAAACCTATTCTCTTTTAATTGACACCTACATTAAGGATCCGCAAGA 12315 Query 64977 AAAGAAGCAGTTATTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATG 65036 ||| | || ||| || || | || |||||||||| | | |||||| | || Sbjct 12314 AAAACAATGCTTGTTTACCGCTATGGATTCTATACCATGTATCAAAAGGAAGGCAGATTG 12255 Query 65037 GGCAATGAAATGG---TTTGACACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTT 65093 |||| || |||| | ||| | | |||| |||| || ||| | || | || || Sbjct 12254 GGCACTGCGATGGATATCTGATAGAGAGTC---AACCTTTGCGGAGAGACTCGTCGCTTT 12198 Query 65094 TGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGGTTGAAGA 65152 || ||| |||||||| ||||| || || ||||| |||| | |||| ||| | |||| Sbjct 12197 CGCTGCTGTTGAGGGTATTTTCTTTTCTGGATCATT-TGCGTCAATTTTCTGGATCAAGA 12139 Query 65153 AGCGGGGTCTCATGCCAGG 65171 || |||| |||||||| || Sbjct 12138 AGAGGGGCCTCATGCCCGG 12120 >seq6460 Length=17344 Score = 84.2 bits (92), Expect = 3e-11 Identities = 152/220 (69%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 177747 AATCTTCTTTGTGAC-AAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTC 177805 |||||| |||| || ||||| | ||||| || || ||| || ||||||||||| | Sbjct 5630 AATCTTTCTTGTAACGAAAGTGCG-ACCTCTCCTAGGGCTTTCATGATTGAAGAGGATGC 5688 Query 177806 CGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCA 177865 | ||||||| |||| || || | || |||||||| |||| ||||| || | Sbjct 5689 CATTGCAGGCAAACATGCCGTAAGCCTCGCGGTAATTAACAACGATCCAGTACGCATATA 5748 Query 177866 ATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTT 177925 | || | ||| ||||| ||||| || ||||| || || ||| |||| || |||| Sbjct 5749 ACTTCGCGACACCATAAGGAGATCGAGGATAGAAAGGCGTGCTTTCACTTTGAGGGGTTT 5808 Query 177926 CTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 | || || ||| | | ||||| ||||| |||||||| Sbjct 5809 CCACTACCTTTCCATAGAGTTCCGAGGTTGATGCTTGGTA 5848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596492120523200