Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq4003 120 4e-22 >seq4003 Length=18687 Score = 120 bits (132), Expect = 4e-22 Identities = 288/433 (67%), Gaps = 4/433 (1%) Strand=Plus/Plus Query 18157 ACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAA 18216 ||| || ||||| ||||| || || || || | | ||| || || || | | || || Sbjct 12059 ACAAGCGAAATCGGTGTGCAACCCCTCGTCACGGCTTATCAACTCATTGGAATAGGTCAA 12118 Query 18217 CCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAA 18276 |||||||| | || || || || | ||| || || || || || | ||||||||| Sbjct 12119 ACCGGGCATGAGGCCCCTCTTCTTGATCCAGAAAATTGACGCAAATGATCCAGAAAAGAA 12178 Query 18277 TATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTGCTCA 18335 ||||||||||| ||| ||||| || | | ||| || ||||| | | | | ||| Sbjct 12179 AATACCCTCAACAGCA-GCGAAAGCGACGAGTCTCTCCGCAAAGGT-TGACTCTCTATCA 12236 Query 18336 G-TATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCA 18394 | ||||||| ||||||| ||| | | ||||| |||||| || ||||| Sbjct 12237 GATATCCATCGCAGTGCCCAATCTGCCTTCCTTTTGATACATGGTATAGAATCCATAGCG 12296 Query 18395 TTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATAC 18454 ||||||| | |||||||| | ||| || || || ||||| ||||| | |||||| Sbjct 12297 GTAAACAAGCATTGTTTTTCTTGCGGATCCTTAATGTAGGTGTCAATTAAAAGAGAATAG 12356 Query 18455 ATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGA 18514 |||| || || | ||||||| || || || | ||| || ||| || |||| Sbjct 12357 GTTTCCGAGTGCACATTTTCCATCATAATTTGGAATCCATAGAAGCATCGTGCTTCGGCT 12416 Query 18515 TATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGAT 18574 ||| | || | | |||| |||||||| ||| || || || || || || | | | Sbjct 12417 ATTTGGACTTCACATGAGAATCGTTCTACCAGATTTTCGTTGACAATGCCATCGGATGCT 12476 Query 18575 GCGAAAAATGCCA 18587 || ||||| |||| Sbjct 12477 GCAAAAAAAGCCA 12489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731776948124000