Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq6550 109 5e-19 seq2300 82.4 7e-11 >seq6550 Length=14069 Score = 109 bits (120), Expect = 5e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || | |||||||| || || || || || ||||| ||||| ||| | | Sbjct 9155 GATGCAGATTTTCGTCAAAACGCTGACAGGGAAGACCATCACGCTAGAAGTCGAATCTTC 9214 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||| || || || ||||| ||||| || ||||| Sbjct 9215 TGACACCATTGACAATGTCAAGGCGAAGATTCAGGATAAGGAAGGGATACCACCTGATCA 9274 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| |||||||||| ||||||||||| |||||| | | | ||||| || || Sbjct 9275 GCAGCGTCTGATCTTTGCTGGGAAACAGCTAGAGGATGGTCGCACTCTTTCAGACTACAA 9334 Query 24883 CATTC 24887 ||||| Sbjct 9335 CATTC 9339 Score = 98.7 bits (108), Expect = 9e-16 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||| || || || ||||| ||||| || ||||| || ||| |||||||||| |||||| Sbjct 9738 AAGATTCAGGATAAGGAAGGGATACCACCTGATCAGCAGCGTCTGATCTTTGCTGGGAAA 9797 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 ||||| |||||| | | | ||||| || |||||||| |||||||| || || ||| Sbjct 9798 CAGCTAGAGGATGGTCGCACTCTTTCAGACTACAACATTCAGAAGGAATCTACCCTCCAC 9857 Query 24908 TTGGTGTTGCGATTGCGCGGAGGC 24931 | || | || || || || ||| Sbjct 9858 CTCGTCCTTCGTTTACGTGGCGGC 9881 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| ||||||| || || || ||||| || || || || || ||| || | Sbjct 9882 ATGCAGATCTTCGTTAAAACCCTGACAGGAAAAACGATAACTCTTGAGGTTGAATCCTCA 9941 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||| || || || ||||| || ||||| || || Sbjct 9942 GACACGATCGATAATGTCAAAGCGAAGATACAGGATAAGGAAGGCATTCCTCCGGACCAG 10001 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | || ||||| || || ||| |||||||| | | | | || ||||| ||| Sbjct 10002 CAGCGACTCATTTTTGCTGGCAAGCAGTTGGAGGATGGACGCACCCTTTCTGATTACAAC 10061 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 || || || || || || || ||| Sbjct 10062 ATCCAGAAAGAGTCTACTCTTCAC 10085 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || ||||| || || || || || ||||| || || || | | Sbjct 8928 ATGCAAATTTTTGTGAAGACGCTTACGGGCAAGACCATCACGCTGGAGGTGGAGTCTTCT 8987 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || || || || ||||||||||| || || || || || Sbjct 8988 GACACCATCGACAATGTGAAGGCGAAAATTCAGGACAAAGAAGGTATCCCACCGGACCAG 9047 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | |||||||| || ||||| ||||| ||| | | | |||| ||||| || Sbjct 9048 CAGCGCCTCATCTTTGCTGGAAAACAACTGGAAGATGGTCGTACCCTGTCGGATTACAAT 9107 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 ||||| |||||||| || || || Sbjct 9108 ATTCAGAAGGAATCCACTCTCCA 9130 Score = 86.0 bits (94), Expect = 6e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 24807 GAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAA 24866 |||| ||||| || || || || |||||||| ||||| |||||||| |||||| | | Sbjct 9549 GAATCCCTCCTGACCAGCAGCGATTGATCTTCGCCGGCAAACAGCTCGAGGATGGCCGTA 9490 Query 24867 ACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCG 24926 | || |||||||||||||| ||||| || || || ||| | |||||||| | || | Sbjct 9489 CTCTTTCGGATTATAACATTCAGAAGGAGTCTACTCTGCACCTTGTGTTGCGCCTACGAG 9430 Query 24927 GAGGC 24931 | ||| Sbjct 9429 GCGGC 9425 Score = 82.4 bits (90), Expect = 7e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 24807 GAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAA 24866 |||| ||||| || || || || |||||||| ||||| |||||||| |||||| | | Sbjct 8386 GAATCCCTCCTGACCAGCAGCGATTGATCTTCGCCGGCAAACAGCTCGAGGATGGCCGTA 8445 Query 24867 ACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTG 24916 | || |||||||||||||| ||||| || || || ||| | |||||| Sbjct 8446 CTCTTTCGGATTATAACATTCAGAAGGAGTCTACTCTGCACCTTGTGTTG 8495 >seq2300 Length=1447 Score = 82.4 bits (90), Expect = 7e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||| || || || ||| ||||| || ||| || ||| |||||||||| |||||| Sbjct 1049 AAGATTCAGGATAAGGAAAAGATACCACCTGATTGGCAGCGTCTGATCTTTGCTGGGAAA 990 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 |||||||||||| | | | | ||| | || |||||||| |||||||| || || ||| Sbjct 989 CAGCTGGAGGATGGGCGCACTCTTTCATACTACAACATTCAGAAGGAATCCACCCTCCAC 930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449839169549200