Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq8369 161 7e-34 >seq8369 Length=46333 Score = 161 bits (178), Expect = 7e-34 Identities = 531/827 (64%), Gaps = 59/827 (7%) Strand=Plus/Plus Query 281330 GCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAATA 281389 |||||| || ||| | ||||||| || | || || || || | ||| ||||| Sbjct 16878 GCTTCTTGAACCATACGTTCAATTTCCTCCTTCGACAACCTGCCCTTGTCATTGGTAATC 16937 Query 281390 GTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTG 281449 ||||| || || ||| || | ||| || | ||||| ||||| | |||||| ||| Sbjct 16938 GTAATGCGGTTCGACTTGCCAGTCGTTTTGTCGGAGGCAGAGACATTCAAAATACCGTTG 16997 Query 281450 GCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCT 281509 ||||||| || || ||||||||||||||||| || || | | | || || |||||||| Sbjct 16998 GCATCCATGTCGAAAGTGACTTCAATTTGAGGAACACCGCGCGGCGCTGGAGGGATCCCC 17057 Query 281510 TCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAA 281569 || | || | || || ||| ||||| || ||| | ||||| ||||| | Sbjct 17058 GATAATTCGAACTTGCCAAGCAAATTGTTATCCTTCGTGCGTGCACGTTCTCCCTCATAC 17117 Query 281570 ATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTA 281629 | ||||| ||| | | || ||||| |||||||||| ||||| | | ||| || Sbjct 17118 ACCTGGATGAGAACACCTGGCTGGTTATCCGAATAAGTTGAAAATATTTCTGCTTTCTTC 17177 Query 281630 CAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTC---- 281685 || | || || || | | ||| | |||||| | |||||||||||| || Sbjct 17178 GTTGGCACCGTCGTATTGCGCTTAATCAACGCGGTCATGACACCACCAGCTGTCTCAATA 17237 Query 281686 --------------------------------TAAA-------------CCAAGAGAAAG 281700 |||| || || ||||| Sbjct 17238 CTAAATTTTTTTGAATGACAACGTCGAATGAATAAAATCAAGTACTTACCCGAGTGAAAG 17297 Query 281701 AGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAAT 281760 || | || |||| || | || || ||| ||| || || | |||| |||||| Sbjct 17298 CGGTGCAACGTCAAGAAGTAGAAGATCCTGAGTTTTCTCGGATGTGTCACCAGAAAGAAT 17357 Query 281761 AGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAG 281820 || ||||||| |||||||| ||||| || ||||||||||| |||| | | ||| | Sbjct 17358 GGCCGCTTGAACTGCAGCACCGTATGCGACGGCTTCATCAGGGTTAATGCTCTTATTAGG 17417 Query 281821 TTTTTTACCATTGAAAAAATTTGAAAGAAG-TTGTC-TTACCTTAGGAATACGAGATGAT 281878 | ||| |||||||| || | || | ||| ||| | ||| ||||||||||| || Sbjct 17418 CTCTTTTCCATTGAAGAAGTCAGAGACAAGCTTGACGATAC--GAGGAATACGAGTAGAA 17475 Query 281879 CCTCCAACTAATACAATTTCATGCACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAAC 281937 || ||||| || || || || || || | || | || || | || ||||| | || Sbjct 17476 CCGCCAACCAACACGATATCGTGTACGT-TGCTCTTGTCGATCTTCGAATCACGGAGTAC 17534 Query 281938 TTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGC 281997 ||| || ||||| |||||| || |||| |||| ||| || || ||||| ||| Sbjct 17535 TTTCTCGACGGGCTCAAGAGTGCTTCGGAACAGGTCTTGACACAGCTCCTCGAAACGAGC 17594 Query 281998 TCTAGTAAGAGTGACAT-TA-TAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTA 282055 | ||| | || ||| | || ||||||| || ||| ||| ||||| | |||||| | Sbjct 17595 ACGAGTCA-AG-GACGTGTAGAAATCAATGCCCTCGTACATGGAATCGATTTCAATGGAT 17652 Query 282056 GTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGT 282102 ||||| || | ||||| |||| ||||||||| || ||||| || || Sbjct 17653 GTTTGCGTAGCTGAAGAAAGTGTACGTTTAGCGCGCTCACAAGCAGT 17699 Score = 141 bits (156), Expect = 7e-28 Identities = 258/375 (69%), Gaps = 2/375 (1%) Strand=Plus/Plus Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241 ||||| || ||||| ||||| ||||| || | | ||||| ||| | || || | || Sbjct 17833 ACAAGTCGGTTATCGAAATCCTCACCGCCGAGATGAGTATCTCCAGCGGTGGCCTTGACC 17892 Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301 | ||||| || || || | | | || | |||||| ||||| || |||| |||| Sbjct 17893 TCGAAAATGCCTTCCTCTATTGTGAGGAGGGATACATCAAAAGTTCCTCCTCCCAGATCA 17952 Query 282302 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 282361 || || || ||||| ||| | | || ||||| |||||||| || | ||| || Sbjct 17953 AAGATTAGGACATTGCGTTCCCCGATTACTTTCTTATCGAGACCATATGCGATAGCGGCC 18012 Query 282362 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 282421 ||||||||||| || || |||| | ||| || | |||||| || ||||||||| || Sbjct 18013 GCAGTTGGTTCGTTTATGATTCGGAGAACGTTCAAACCAGCGATGACTCCTGCATCCTTT 18072 Query 282422 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACT 282481 || ||||| | || ||||| || ||||| ||||||||||| | || |||| |||| | Sbjct 18073 GTCGCTTGACGCTGAGAATCATTGAAATACGCAGGAACAGTCACGACTGCAT-TGTTGAT 18131 Query 282482 TCT-TTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAAT 282540 | || || | ||| | || ||| ||||||| ||| || ||| || ||||| Sbjct 18132 CGTGTTCCCTAGATATGACTCGGCGATTTCCCTCATTTTCGTTAGAACCATAGAAGAAAT 18191 Query 282541 TTGTTCTGGAGAATA 282555 || ||| || || || Sbjct 18192 TTCTTCGGGTGACTA 18206 Score = 107 bits (118), Expect = 1e-17 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 282716 GCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATAT 282775 ||| |||| | ||| || || || || |||||| |||| || || |||| | ||||| Sbjct 18607 GCAACTTGGTTTTTAGCGGCGTCACCGATCAGACGTTCCGTGTCGCTAAAGGCGACATAA 18666 Query 282776 GATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCAT 282835 ||||||||||||||||| || ||||| || || ||||| ||||| | |||||||||| Sbjct 18667 GATGGAGTTGTGCGATTGCCCTGATCGTTGGCGATAATCTCAACGCGATCATTTTGCCAA 18726 Query 282836 ACACCTACACAACT 282849 ||||| ||||| || Sbjct 18727 ACACCAACACATCT 18740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740120294908140