Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq6550 150 4e-31 seq2300 93.3 8e-14 seq9516 91.5 3e-13 seq5568 84.2 4e-11 >seq6550 Length=14069 Score = 150 bits (166), Expect = 4e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| ||||| | ||| |||||||| |||||||| || || |||||||| || | | || Sbjct 10097 ACGAAGAACGAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGAAAGGGTGCGTCC 10038 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || | || || |||||||| || |||| || || || ||||| || |||||||| Sbjct 10037 ATCCTCCAACTGCTTGCCAGCAAAAATGAGTCGCTGCTGGTCCGGAGGAATGCCTTCCTT 9978 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGG-TTCTACTTCCAAAGTTA 82773 ||| || ||||| ||||| ||||| || ||||| || | ||| ||| || || | ||||| Sbjct 9977 ATCCTGTATCTTCGCTTTGACATTATCGATCGTGTC-TGAGGATTCAACCTCAAGAGTTA 9919 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || ||||||| || || || || |||||||| Sbjct 9918 TCGTTTTTCCTGTCAGGGTTTTAACGAAGATCTGCAT 9882 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| ||||| ||||| ||||| ||||| || || | | ||| ||||| |||||| Sbjct 9130 TGGAGAGTGGATTCCTTCTGAATATTGTAATCCGACAGGGTACGACCATCTTCCAGTTGT 9071 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 |||||||||||||| || | || || || || || || ||||| || || ||||| || Sbjct 9070 TTTCCAGCAAAGATGAGGCGCTGCTGGTCCGGTGGGATACCTTCTTTGTCCTGAATTTTC 9011 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || || ||||| || || || ||| || || || |||| || || |||||||| || Sbjct 9010 GCCTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCCAGCGTGATGGTCTTGCCCGTA 8951 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | |||||| ||||| || ||||| Sbjct 8950 AGCGTCTTCACAAAAATTTGCAT 8928 Score = 140 bits (154), Expect = 6e-28 Identities = 140/182 (77%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 82629 ATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTT 82688 || || || || || ||| | | ||| || ||||| ||||| ||||||||||| || | Sbjct 9337 ATGTTGTAGTCTGAAAGAGTGCGACCATCCTCTAGCTGTTTCCCAGCAAAGATCAGACGC 9278 Query 82689 TGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTA 82748 || ||||| || ||||| ||||||||||| |||||||| || || ||||| ||||| || Sbjct 9277 TGCTGATCAGGTGGTATCCCTTCCTTATCCTGAATCTTCGCCTTGACATTGTCAATGGTG 9218 Query 82749 TCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGC 82808 ||| || ||| ||||| | || || ||||| ||||||| ||| || || || |||||| Sbjct 9217 TCAGAAGATTCGACTTCTAGCGTGATGGTCTTCCCTGTCAGCGTTTTGACGAAAATCTGC 9158 Query 82809 AT 82810 || Sbjct 9157 AT 9156 Score = 127 bits (140), Expect = 4e-24 Identities = 123/158 (78%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 82593 AAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTA 82652 ||||| || || | ||| || |||||||| ||||| || || || || || ||| | | | Sbjct 9871 AAACGAAGGACGAGGTGGAGGGTAGATTCCTTCTGAATGTTGTAGTCTGAAAGAGTGCGA 9812 Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 || || ||||| ||||| ||||||||||| || | || ||||| || ||||| |||||| Sbjct 9811 CCATCCTCTAGCTGTTTCCCAGCAAAGATCAGACGCTGCTGATCAGGTGGTATCCCTTCC 9752 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATC 82750 ||||| |||||||| || || ||||| ||||| || || Sbjct 9751 TTATCCTGAATCTTCGCCTTGACATTGTCAATGGTGTC 9714 >seq2300 Length=1447 Score = 93.3 bits (102), Expect = 8e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | ||| || || ||||| ||||| || || || | || ||| | | || Sbjct 918 ACGAAGGACGAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTATGAAAGAGTGCGCCC 977 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || ||||| ||||||||||| || | || ||| || ||||| |||||| Sbjct 978 ATCCTCCAGCTGTTTCCCAGCAAAGATCAGACGCTGCCAATCAGGTGGTATCTTTTCCTT 1037 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||| |||||||| || || |||| ||||| | ||| || | || |||| || || Sbjct 1038 ATCCTGAATCTTCGCCTTGACATCGTCAATGATGTCAGAAGACTTCACCTCCAGGGTGAT 1097 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||| || | ||| ||||| || ||||| Sbjct 1098 ACTCTTGCCCGTAAGTCCCTTCACAAAAATTTGCAT 1133 >seq9516 Length=56271 Score = 91.5 bits (100), Expect = 3e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 82707 CCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCC 82766 |||||||| ||||| ||||| || || ||||| ||||||||||| | ||| || ||| Sbjct 48070 CCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCAATCGTATCGGAGGATTCAACCTCC 48129 Query 82767 AAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 || || || |||||||| |||| ||||| ||||| || |||||| Sbjct 48130 AACGTAATGGTCTTGCCGGTCAGGGTCTTGACAAAAATTTGCATT 48174 Score = 89.7 bits (98), Expect = 1e-12 Identities = 99/131 (76%), Gaps = 1/131 (1%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| || || || || ||||||||||| || ||| ||| ||| ||||| |||||| Sbjct 47923 TGAAGAGTTGACTCCTTTTGGATATTATAATCCGAGAGAGTTCGACCATCTTCAAGTTGT 47982 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || ||||| || || | ||||||||| || || || | || || | |||| | ||| Sbjct 47983 TTGCCGGCAAAAATGAGACGTTGTTGATCAGGGGGGATACTATCGTTCTATTGAGTTTTT 48042 Query 82728 -GCTTTTACAT 82737 |||| |||| Sbjct 48043 ATCTTTGACAT 48053 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 82707 CCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCC 82766 |||||||| ||||| ||||| || || ||||| ||||||||||| | ||| || ||| Sbjct 48346 CCTTCCTTGTCTTGGATCTTAGCCTTGACATTGTCAATCGTATCGGAGGATTCAACCTCC 48405 Query 82767 AAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 || || || ||||| || ||||| ||||| || || || |||||| Sbjct 48406 AACGTAATGGTCTTTCCGGTCAAAGTCTTAACGAAAATTTGCATT 48450 >seq5568 Length=9436 Score = 84.2 bits (92), Expect = 4e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | ||| || || ||||| ||||| || || || | || ||| | | || Sbjct 6518 ACGAAGGACGAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTATGAAAGAGTGCGCCC 6577 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || ||||| ||||||||||| || | || ||| || ||||| ||||| Sbjct 6578 ATCCTCCAGCTGTTTCCCAGCAAAGATCAGACGCTGCCAATCAGGTGGTATCTTCTCCTT 6637 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||| |||||| | || || |||| ||||| | ||| || | || |||| || || Sbjct 6638 ATCCTGAATCCTCGCCTTGACATCGTCAATGATGTCAGAAGACTTCACCTCCAGGGTGAT 6697 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||| || | ||| ||||| || ||||| Sbjct 6698 ACTCTTGCCCGTAAGTCCCTTCACAAAAATTTGCAT 6733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981696497322210