Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq9516 116 4e-21 seq6550 113 4e-20 seq8842 95.1 1e-14 seq4003 82.4 7e-11 >seq9516 Length=56271 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||||||||| || ||||| || | |||| | | | || ||||| |||||||| || Sbjct 47706 CTCTTTCTGGATGTTGTAGTCAGAGAGCGTGCGGCCA-TCTTCGAGTTGCTTGCCAGCAA 47764 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 |||| || ||||||||||||||||| ||||| |||||||| ||||| ||||| | Sbjct 47765 AAATTAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGT 47824 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 |||| ||||| | | |||||| || | ||| | || || |||||||| || || | Sbjct 47825 TGTCAATGGTGTCCGAAGACTCCACCTCAAGGGTAATCGTCTTTCCGGTCAGTGTCTTGA 47884 Query 133648 CGAAAATCTGCAT 133660 | ||||||||||| Sbjct 47885 CAAAAATCTGCAT 47897 >seq6550 Length=14069 Score = 113 bits (124), Expect = 4e-20 Identities = 146/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||||||||| || |||||||| | ||| | | | ||||| | ||||||||| Sbjct 10078 GTAGACTCTTTCTGGATGTTGTAATCAGAAAGGGTGCGTCCA-TCCTCCAACTGCTTGCC 10020 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || ||||||| ||||||||||| ||||| ||||||||||| || ||||| || Sbjct 10019 AGCAAAAATGAGTCGCTGCTGGTCCGGAGGAATGCCTTCCTTATCCTGTATCTTCGCTTT 9960 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || || || || | || | ||||| || ||||| || Sbjct 9959 GACATTATCGATCGTGTCTGAGGATTCAACCTCAAGAGTTATCGTTTTTCCTGTCAGGGT 9900 Query 133643 TTTTACGAAAATCTGCATG 133661 ||| ||||| ||||||||| Sbjct 9899 TTTAACGAAGATCTGCATG 9881 Score = 89.7 bits (98), Expect = 5e-13 Identities = 143/200 (72%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| || ||||| ||||||||||| || || ||| | || || || || || || Sbjct 9124 GTGGATTCCTTCTGAATATTGTAATCCGACAGGGTACGACCA-TCTTCCAGTTGTTTTCC 9066 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG-CT 133581 || | ||||| ||||||||||| || ||||| ||||| ||||| ||| ||| | || Sbjct 9065 AGCAAAGATGAGGCGCTGCTGGTCCGGTGGGATACCTTCTTTGTC-CTGAATTTTCGCCT 9007 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | ||||| | | |||||| || | |||| ||| ||||| || || | Sbjct 9006 TCACATTGTCGATGGTGTCAGAAGACTCCACCTCCAGCGTGATGGTCTTGCCCGTAAGCG 8947 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || || ||||| |||||| Sbjct 8946 TCTTCACAAAAATTTGCATG 8927 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||| || || || | || || |||||||| || || || || |||||||| Sbjct 9310 TCCTCTAGCTGTTTCCCAGCAAAGATCAGACGCTGCTGATCAGGTGGTATCCCTTCCTTA 9251 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||| ||||| | |||| ||||| | | || || || | |||| | Sbjct 9250 TCCTGAATCTTCGCCTTGACATTGTCAATGGTGTCAGAAGATTCGACTTCTAGCGTGATG 9191 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || ||||| ||||| |||||||||||||| Sbjct 9190 GTCTTCCCTGTCAGCGTTTTGACGAAAATCTGCAT 9156 >seq8842 Length=1545 Score = 95.1 bits (104), Expect = 1e-14 Identities = 128/176 (73%), Gaps = 2/176 (1%) Strand=Plus/Plus Query 120364 ACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATAAACTCGAAC 120423 ||||| |||||||| |||||||||||||| | || ||| || | ||| || ||||| Sbjct 1127 ACGCGCTTCTCAAAGAAGTTTGTTTTGCCTTGCAACGATATTAAATCCATGAAATCGAAG 1186 Query 120424 GGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCGGTCCGCTACA 120483 || ||| | | | | | || ||| | | ||||||| | |||| || ||| || ||| Sbjct 1187 GGATTGTTTGAATGATAATACTTCTGGTTGCCCAACGAGAGAAGCAATCTGTCTGCAACA 1246 Query 120484 AACTCAATGTACTCGCACATG-GACTGCGCGTTCATGCCCAGCAACGCCACCGGCA 120538 ||||| ||||| | ||||||| |||| | |||||| || | ||||| || |||| Sbjct 1247 AACTCTATGTATTGGCACATGAGACT-AGAGTTCATCCCAATTAACGCAACAGGCA 1301 >seq4003 Length=18687 Score = 82.4 bits (90), Expect = 7e-11 Identities = 117/165 (71%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 120642 GCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAG 120701 |||||| || || ||||||| |||||||||||| || || |||||||| ||||||| Sbjct 14190 GCACGCGAAATCTGTGTGCATGCCCTCGTCGCGGGAAATGAGCTCGTTTGAGAACGTCAA 14131 Query 120702 GCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAA 120761 ||| ||||| | || | |||||| |||| || | ||||| ||| || ||||| Sbjct 14130 GCCTGGCATAAGCCCCCTTTTCTTGAGCCAGAAGATAGACGCAAACGAGCCAGAGAAGAA 14071 Query 120762 CACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGT 120806 | ||| || || || || || |||| ||| || || || || Sbjct 14070 AATGCCTTCAACTGCAGCGAATGCCACCAAGCGTTCAGCAAATGT 14026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483358015723600