Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq6550 111 1e-19 seq9516 98.7 7e-16 >seq6550 Length=14069 Score = 111 bits (122), Expect = 1e-19 Identities = 149/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||| |||||| || || || || |||||||| || || || || | || |||| ||| Sbjct 9131 ATGGAGAGTGGATTCCTTCTGAATATTGTAATCCGACAGGGTACGACCATCTTCCAGTTG 9072 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 |||||| ||||| || | |||||||| || | || | |||||||||||| |||||| Sbjct 9071 TTTTCCAGCAAAGATGAGGCGCTGCTGGTCCGGTGGGATACCTTCTTTGTCCTGAATTTT 9012 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 | ||| |||| ||| | |||||| || ||||| || | |||||| || || || | Sbjct 9011 CGCCTTC-ACATTGTCGATGGTGTCAGAAGACTCCACCTCCAGCGTGATGGTCTTGCCCG 8953 Query 33725 TTAACGTTTTTACAAAGATCTGCAT 33749 | | ||| || ||||| || ||||| Sbjct 8952 TAAGCGTCTTCACAAAAATTTGCAT 8928 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||| |||||| || ||||||||||| || || |||||| | || ||||| || Sbjct 10084 TGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGAAAGGGTGCGTCCATCCTCCAACTGC 10025 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || |||||||| | |||||||| || | || | ||||| || || || ||| Sbjct 10024 TTGCCAGCAAAAATGAGTCGCTGCTGGTCCGGAGGAATGCCTTCCTTATCCTGTATCTTC 9965 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 | || |||| || | ||||| ||||| || |||| || |||||||| ||||| Sbjct 9964 -GCTTTGACATTATCGATCGTGTCTGAGGATTCAACCTCAAGAGTTATCGTTTTTCCTGT 9906 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 | ||||| || ||||||||||| Sbjct 9905 CAGGGTTTTAACGAAGATCTGCAT 9882 Score = 93.3 bits (102), Expect = 3e-14 Identities = 132/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 33568 ATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGC 33627 |||||||| || || || ||||| | || || | ||||| || ||||| |||| |||| Sbjct 9337 ATGTTGTAGTCTGAAAGAGTGCGACCATCCTCTAGCTGTTTCCCAGCAAAGATCAGACGC 9278 Query 33628 TGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGT 33686 |||||||| | || | ||||| || || ||| ||| | | |||| ||| | ||| Sbjct 9277 TGCTGATCAGGTGGTATCCCTTCCTTATCCTGAATCTTC-GCCTTGACATTGTCAATGGT 9219 Query 33687 GTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTG 33746 ||| ||||| || || | |||||| || || ||||| | |||||| || || ||||| Sbjct 9218 GTCAGAAGATTCGACTTCTAGCGTGATGGTCTTCCCTGTCAGCGTTTTGACGAAAATCTG 9159 Query 33747 CAT 33749 ||| Sbjct 9158 CAT 9156 >seq9516 Length=56271 Score = 98.7 bits (108), Expect = 7e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 33553 GTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCG 33612 ||||||||||| || |||||||| || ||||| ||||| | || || | ||| || || Sbjct 47701 GTGCTCTCTTTCTGGATGTTGTAGTCAGAGAGCGTGCGGCCATCTTCGAGTTGCTTGCCA 47760 Query 33613 GCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTC 33672 |||||||| | ||||||||| || | || | || || ||||| ||| ||| | | Sbjct 47761 GCAAAAATTAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTC-GCCTT 47819 Query 33673 AACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGT 33731 || | ||| | |||||| || ||||| |||| || ||||| || || || | || Sbjct 47820 GACGTTGTCAATGGTGTCCGAAGACTCCACCTCAAGGGTAATCGTCTTTCCGGTCAGTGT 47879 Query 33732 TTTTACAAAGATCTGCAT 33749 || ||||| |||||||| Sbjct 47880 CTTGACAAAAATCTGCAT 47897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328662376828800