Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq6550 120 3e-22 seq9516 107 2e-18 seq2300 104 2e-17 seq5568 98.7 1e-15 >seq6550 Length=14069 Score = 120 bits (132), Expect = 3e-22 Identities = 137/184 (74%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 134530 GAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAAC 134589 ||||||||||||| || ||| || || || |||||||| || ||||| |||| || Sbjct 9339 GAATGTTGTAGTCTGAAAGAGTGCGACCATCCTCTAGCTGTTTCCCAGCAAAGATCAGAC 9280 Query 134590 GCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATG 134649 |||||||||| || ||||| ||||| || || ||||| || ||||| ||| | | Sbjct 9279 GCTGCTGATCAGGTGGTATCCCTTCCTTATCCTGAATCTTCGCCTTGACATTGTCAATGG 9220 Query 134650 TGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTT 134709 |||| || ||||| || || || || ||||| || || || | ||||| |||||||| | Sbjct 9219 TGTCAGAAGATTCGACTTCTAGCGTGATGGTCTTCCCTGTCAGCGTTTTGACGAAAATCT 9160 Query 134710 GCAT 134713 |||| Sbjct 9159 GCAT 9156 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| || || || || || || |||||||| || || |||| | || || Sbjct 10090 ACGAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGAAAGGGTGCGTCCATCCTCC 10031 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 | ||| ||||| |||||||| | |||||||| || || || |||||||| || || || Sbjct 10030 AACTGCTTGCCAGCAAAAATGAGTCGCTGCTGGTCCGGAGGAATGCCTTCCTTATCCTGT 9971 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || |||||| || | ||||| || ||||| || || ||||| || ||||| Sbjct 9970 ATCTTCGCTTTGACATTATCGATCGTGTCTGAGGATTCAACCTCAAGAGTTATCGTTTTT 9911 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | ||||||||||| || ||||| Sbjct 9910 CCTGTCAGGGTTTTAACGAAGATCTGCAT 9882 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 ||||| || || ||||||||||| ||||| ||||| || | ||| || || || Sbjct 9136 ACGAGATGGAGAGTGGATTCCTTCTGAATATTGTAATCCGACAGGGTACGACCATCTTCC 9077 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || ||||| || ||||| || | |||||||| || || || || |||||||| || ||| Sbjct 9076 AGTTGTTTTCCAGCAAAGATGAGGCGCTGCTGGTCCGGTGGGATACCTTCTTTGTCCTGA 9017 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 ||||| || || ||| | ||||| || || ||||| || || || ||||| || Sbjct 9016 ATTTTCGCCTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCCAGCGTGATGGTCTTG 8957 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || || || ||||||||||| Sbjct 8956 CCCGTAAGCGTCTTCACAAAAATTTGCAT 8928 Score = 109 bits (120), Expect = 6e-19 Identities = 99/125 (79%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| || || |||||||| |||||||||||||| || ||| || || || Sbjct 9862 ACGAGGTGGAGGGTAGATTCCTTCTGAATGTTGTAGTCTGAAAGAGTGCGACCATCCTCT 9803 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 |||||||| || ||||| |||| |||||||||||| || ||||| ||||| || || ||| Sbjct 9802 AGCTGTTTCCCAGCAAAGATCAGACGCTGCTGATCAGGTGGTATCCCTTCCTTATCCTGA 9743 Query 134625 ATTTT 134629 || || Sbjct 9742 ATCTT 9738 >seq9516 Length=56271 Score = 107 bits (118), Expect = 2e-18 Identities = 148/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 ||||| | |||| || || || ||||||||||| | ||| | || ||||| Sbjct 47692 AGGTGCAACGTGCTCTCTTTCTGGATGTTGTAGTCAGAGAGCGTGCGGCCATCTTCGAGT 47751 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || ||||| |||||||| | ||||||||| ||||| || ||||| || || || ||||| Sbjct 47752 TGCTTGCCAGCAAAAATTAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATC 47811 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || ||||| ||| | ||||| || || ||||| || || ||||| || || ||| Sbjct 47812 TTCGCCTTGACGTTGTCAATGGTGTCCGAAGACTCCACCTCAAGGGTAATCGTCTTTCCG 47871 Query 134688 GTTAAAGTTTTAACGAAAATTTGCATT 134714 || | || || || ||||| |||||| Sbjct 47872 GTCAGTGTCTTGACAAAAATCTGCATT 47898 >seq2300 Length=1447 Score = 104 bits (114), Expect = 2e-17 Identities = 153/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| || ||||||||||| ||||||||||||| || ||| | || || Sbjct 925 ACGAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTATGAAAGAGTGCGCCCATCCTCC 984 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 |||||||| || ||||| |||| ||||||| ||| || ||||| ||| || || ||| Sbjct 985 AGCTGTTTCCCAGCAAAGATCAGACGCTGCCAATCAGGTGGTATCTTTTCCTTATCCTGA 1044 Query 134625 ATTTTTTGTTTGACCGCGTCCAATG-TGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 || || ||||| ||| ||||| |||| || || | ||| || || || || | || Sbjct 1045 ATCTTCGCCTTGACATCGT-CAATGATGTCAGAAGACTTCACCTCCAGGGTGATACTCTT 1103 Query 134684 ACCGGTTAAAGT--TTTAACGAAAATTTGCAT 134713 || || |||| || || ||||||||||| Sbjct 1104 GCCCGT--AAGTCCCTTCACAAAAATTTGCAT 1133 >seq5568 Length=9436 Score = 98.7 bits (108), Expect = 1e-15 Identities = 154/214 (72%), Gaps = 10/214 (5%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| || ||||||||||| ||||||||||||| || ||| | || || Sbjct 6525 ACGAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTATGAAAGAGTGCGCCCATCCTCC 6584 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT--TTTTCTT 134622 |||||||| || ||||| |||| ||||||| ||| || ||||| ||||| || || | Sbjct 6585 AGCTGTTTCCCAGCAAAGATCAGACGCTGCCAATCAGGTGGTAT--CTTCTCCTTATCCT 6642 Query 134623 GAATTTTTTGTTTGACCGCGTCCAATG-TGTCGGACGATTCCACGTCGAGAGTAATGGTT 134681 |||| | ||||| ||| ||||| |||| || || | ||| || || || || | Sbjct 6643 GAATCCTCGCCTTGACATCGT-CAATGATGTCAGAAGACTTCACCTCCAGGGTGATACTC 6701 Query 134682 TTACCGGTTAAAGT--TTTAACGAAAATTTGCAT 134713 || || || |||| || || ||||||||||| Sbjct 6702 TTGCCCGT--AAGTCCCTTCACAAAAATTTGCAT 6733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505332761382800