Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq4003 159 5e-34 seq9433 107 3e-18 >seq4003 Length=18687 Score = 159 bits (176), Expect = 5e-34 Identities = 388/580 (67%), Gaps = 16/580 (3%) Strand=Plus/Minus Query 39599 AAATGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAAT 39658 ||||| | |||| |||||| ||||| || || | |||||| || | ||| | Sbjct 14207 AAATGGCTGAACAATAAGCACGCGAAATCTGTGTGCATGCCCTCGTCGCGGGAAATGAGC 14148 Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718 ||||| || || || | || ||||| || || | || |||||||| || || | ||| Sbjct 14147 TCGTTTGAGAACGTCAAGCCTGGCATAAGCCCCCTTTTCTTGAGCCAGAAGATAGACGCA 14088 Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAAC-AAGTCTCTCTCCGTA 39777 || || ||||| ||||| |||||||| ||||| || ||||| || ||| | || | | Sbjct 14087 AACGAGCCAGAGAAGAAAATGCCTTCAACTGCAGCGAATGCCACCAAGCGT---TCAGCA 14031 Query 39778 ACTTGTATCATTAT--GT-----ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACAC 39830 | | || | ||| | || ||||| | |||||||| || |||||||| | || Sbjct 14030 AAT-GT-TGATTGTTGGTCAGAGATCCATCTTAACGCCCAATCCGCCTTCTTCTTGATAC 13973 Query 39831 AAGGCATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATG 39890 | || || || || ||||||| |||||| | | || | ||| || | || | Sbjct 13972 AGGGTATAGTGTCGATAGCATCGAAGAGAAATTCACGTTGGCGAGAATCCTTTATGTAGG 13913 Query 39891 TATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGT 39950 |||| || | || ||| ||||||||||||||||||| ||| || || || |||| Sbjct 13912 TATCGATAAGGAGGGAATATGTTTCTGAATGGATGTTTTCCATCATTATTTGGAAACCGT 13853 Query 39951 AAAAACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCAT 40010 | || || | ||||| | || ||||||||| | |||||| || | | ||| || | Sbjct 13852 AGAAGCAGCGCGCTTCGGCAACTTGTACCTCGTTAGAAAATCGCTCTACGAGATTCTCGT 13793 Query 40011 TCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCAT 40070 | || || ||||| ||| ||||| || |||| || ||| || || | ||||| Sbjct 13792 TGACAATGCCATCGGAAGCAGCAAAGAACGCCAGAACGTGTGATATGAAGTGGCGTTCAT 13733 Query 40071 CG--GGTG-TCAATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTG 40127 | | || ||| ||||||||| | || || || | || | ||||| || | Sbjct 13732 TGTCGTTGAGGCGTTTGGTCCAGTCATGAAGGTCCTTAGAGAGGTCCATCTCTTCTGCCG 13673 Query 40128 TCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATAT 40167 |||| || || || || || || |||||||| | |||||| Sbjct 13672 TCCAGAAAGAGGCTTCGGCTTTCTTGTACATCTGCCATAT 13633 Score = 154 bits (170), Expect = 2e-32 Identities = 280/409 (68%), Gaps = 3/409 (1%) Strand=Plus/Plus Query 39638 CCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTT 39697 ||||| || | || || || || || ||| | || | || ||||| || || | ||| Sbjct 12081 CCCTCGTCACGGCTTATCAACTCATTGGAATAGGTCAAACCGGGCATGAGGCCCCTCTTC 12140 Query 39698 TTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAAT 39757 |||| ||| || || | ||||| |||||||||||||| || || || || || || || Sbjct 12141 TTGATCCAGAAAATTGACGCAAATGATCCAGAAAAGAAAATACCCTCAACAGCAGCGAAA 12200 Query 39758 GCAACAAGTCTCTCTCCGTAACTTGTATC---ATTATGTATCCACTTCTGTGCCCAATCA 39814 || || |||||||| | | ||| || || | |||||| | |||||||||| Sbjct 12201 GCGACGAGTCTCTCCGCAAAGGTTGACTCTCTATCAGATATCCATCGCAGTGCCCAATCT 12260 Query 39815 GCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCATCA 39874 || ||| | || | ||| || || | || ||||| |||| | | |||||||| | Sbjct 12261 GCCTTCCTTTTGATACATGGTATAGAATCCATAGCGGTAAACAAGCATTGTTTTTCTTGC 12320 Query 39875 CTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCAATC 39934 ||| |||| || || || ||||| ||| ||| |||| || || | ||||| ||| Sbjct 12321 GGATCCTTAATGTAGGTGTCAATTAAAAGAGAATAGGTTTCCGAGTGCACATTTTCCATC 12380 Query 39935 GCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTT 39994 || || ||||| || || |||| |||||| | ||||| || || | | |||| | Sbjct 12381 ATAATTTGGAATCCATAGAAGCATCGTGCTTCGGCTATTTGGACTTCACATGAGAATCGT 12440 Query 39995 TCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCA 40043 || ||| |||||| || || || ||||| || |||||||| |||| Sbjct 12441 TCTACCAGATTTTCGTTGACAATGCCATCGGATGCTGCAAAAAAAGCCA 12489 >seq9433 Length=11862 Score = 107 bits (118), Expect = 3e-18 Identities = 178/257 (69%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 69871 AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATA 69930 ||||| || || || ||| ||||| || | |||||| |||||||||||||| || Sbjct 2739 AGACCAATACCGCCGGCCGTTTTACTAATCATCGCACAATTCTTCAATGTGTCATAGATG 2798 Query 69931 CCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATA 69990 ||||| || || ||| ||||| || ||| || || | | |||| ||| | Sbjct 2799 CCCTCGATCGAGTCTTCTTTCATGCAAACAAGGAAGCATGAACTGAGTTGAGGATTTGGC 2858 Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050 ||||| ||||| ||||| || |||||||| ||||| || | || || | ||||| Sbjct 2859 GTTCCGGCATTGAATAAGGTGGGAGATGCATGAGTAAAGTAACGCTCGGACATGAGATTA 2918 Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110 || || || ||| | || ||||| | | |||||| || | ||||| ||||| | | Sbjct 2919 TAAGTCTCGATAACACGATCGATATCACTCCCATGAATACCGACGGCGACCCGCATAATC 2978 Query 70111 ATATGCTGAGGTCGTTC 70127 |||||||| ||||| || Sbjct 2979 ATATGCTGTGGTCGCTC 2995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686819587719600