Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq4003 194 1e-44 >seq4003 Length=18687 Score = 194 bits (214), Expect = 1e-44 Identities = 378/557 (68%), Gaps = 6/557 (1%) Strand=Plus/Minus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 || ||||| |||| || || || || || || || ||||| ||||| || |||| | Sbjct 12616 ATTTGGCACTTGTATAAGAAGGCCCAAGCTTCGTTCTGGACTGCAGAGGAGATTGACCTT 12557 Query 43790 ACTAAAGACTTAGCACATTGGATTGCA---TTAAAACCACAAGAAAAACATTTTATATCT 43846 || | || | | | ||||| || | ||||| | | ||| |||| ||||| Sbjct 12556 TCTCACGATCTCGTAGATTGGTCTGAACGCTTAAATGCGGACGAACGCTATTTCCTATCT 12497 Query 43847 TTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGG 43906 || |||| |||||||| || ||| || || ||||| |||||| |||| || Sbjct 12496 CGAGTCCTGGCTTTTTTTGCAGCATCCGATGGCATTGTCAACGAAAATCTGGTAGAACGA 12437 Query 43907 TTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATA 43966 || | ||||| ||| || | ||||||||||| || ||||| || |||||| || Sbjct 12436 TTCTCATGTGAAGTCCAAATAGCCGAAGCACGATGCTTCTATGGATTCCAAATTATGATG 12377 Query 43967 GAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCAC 44026 |||||| | || ||||||| || |||| | || || || ||||| || ||| ||| Sbjct 12376 GAAAATGTGCACTCGGAAACCTATTCTCTTTTAATTGACACCTACATTAAGGATCCGCAA 12317 Query 44027 GAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGAC 44086 || || || | ||||||| || || || | |||| || ||| || ||||| Sbjct 12316 GAAAAACAATGCTTGTTTACCGCTATGGATTCTATACCATGTATCAAAAGGAAGGCAGAT 12257 Query 44087 TGGGCCCTTAAATGGATAAATTCAAATGATTCT---TTTGGAGAACGACTTGTCGCGTTT 44143 ||||| || ||||||| | | || || |||| || |||| ||||| || Sbjct 12256 TGGGCACTGCGATGGATATCTGATAGAGAGTCAACCTTTGCGGAGAGACTCGTCGCTTTC 12197 Query 44144 GCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAA 44203 || | ||| || || ||||||||||| ||||| |||||| | || || ||| | ||||| Sbjct 12196 GCTGCTGTTGAGGGTATTTTCTTTTCTGGATCATTTGCGTCAATTTTCTGGATCAAGAAG 12137 Query 44204 CGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTA 44263 | || | ||||| || ||||| | ||| |||||||| ||||| ||||| || || || Sbjct 12136 AGGGGCCTCATGCCCGGTTTGACCTATTCCAATGAGTTGATAAGCCGTGACGAGGGGTTG 12077 Query 44264 CATTGCGATTTTGCTTG 44280 || |||||| ||||| Sbjct 12076 CACACCGATTTCGCTTG 12060 Score = 125 bits (138), Expect = 6e-24 Identities = 375/571 (66%), Gaps = 22/571 (4%) Strand=Plus/Plus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 |||||||| |||||||| ||||| | || || || ||||| |||||||| | || | Sbjct 13633 ATATGGCAGATGTACAAGAAAGCCGAAGCCTCTTTCTGGACGGCAGAAGAGATGGACCTC 13692 Query 43790 ACTAAAGACTTAGCACATTGGATTGCATTAAA-------ACCACAA-GAAAAACATTTTA 43841 |||| ||| | ||| || || | ||| || |||| ||| || || | Sbjct 13693 TCTAAGGACCTT---CAT--GACTGGACCAAACGCCTCAACGACAATGAACGCCACTTCA 13747 Query 43842 TATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTA 43901 |||| ||| ||||||| |||||||| ||| || || ||||| || ||| | || Sbjct 13748 TATCACACGTTCTGGCGTTCTTTGCTGCTTCCGATGGCATTGTCAACGAGAATCTCGTAG 13807 Query 43902 GTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTG 43961 || ||| | | || || ||| | | ||||| || || || || || || ||||| Sbjct 13808 AGCGATTTTCTAACGAGGTACAAGTTGCCGAAGCGCGCTGCTTCTACGGTTTCCAAATAA 13867 Query 43962 CCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATG 44021 || ||||| || ||||| |||| || || || || ||||| ||||| || ||| Sbjct 13868 TGATGGAAAACATCCATTCAGAAACATATTCCCTCCTTATCGATACCTACATAAAGGATT 13927 Query 44022 GGCACGAGAAGCATCGATTG---TTTAATGCGATAGAAACAGTACCTGCGATTAAACATA 44078 | || || | | ||| || |||| || || || |||| || || | | Sbjct 13928 --CTCGCCAA-CGTGAATTTCTCTTCGATGCTATCGACACTATACCCTGTATCAAGAAGA 13984 Query 44079 AAGCAGACTGGGCCCTTAAATGGATAAATT-CAAATGATT--CTTTTGGAGAACGACTTG 44135 | || || ||||| | | |||||| | | || || | |||| ||||| | | Sbjct 13985 AGGCGGATTGGGCGTTAAGATGGATCTCTGACCAACAATCAACATTTGCTGAACGCTTGG 14044 Query 44136 TCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGT 44195 | || || || | || |||||||||||||| || || ||||||||| | || || ||| Sbjct 14045 TGGCATTCGCTGCAGTTGAAGGCATTTTCTTCTCTGGCTCGTTTGCGTCTATCTTCTGGC 14104 Query 44196 TAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATG 44255 | |||||| | || | ||||| || |||||||| ||||| ||| | || || || | Sbjct 14105 TCAAGAAAAGGGGGCTTATGCCAGGCTTGACGTTCTCAAACGAGCTCATTTCCCGCGACG 14164 Query 44256 AAGGCTTACATTGCGATTTTGCTTGCTTGTT 44286 | ||| | || ||||| || ||||| || Sbjct 14165 AGGGCATGCACACAGATTTCGCGTGCTTATT 14195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397405670891950