Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq4003 116 5e-21 seq9433 87.8 2e-12 >seq4003 Length=18687 Score = 116 bits (128), Expect = 5e-21 Identities = 340/510 (67%), Gaps = 23/510 (5%) Strand=Plus/Minus Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736 ||||| || |||||||| || || |||||||| | |||||||| || |||| ||| Sbjct 14168 CCCTCGTCGCGGGAAATGAGCTCGTTTGAGAACGTCAAGCCTGGCATAAGCCCCCTTTTC 14109 Query 122737 TTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 122795 || | ||| | |||| |||| || || || |||||||| || || || || || || Sbjct 14108 TTGAGCCAGAAGATAGACGCA-AACGAGCCAGAGAAGAAAATGCCTTCAACTGCAGCGAA 14050 Query 122796 CGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAAACCATTTCATTGCCCATT 122854 || | | |||||| || || | || || | || | |||| | | ||||| | Sbjct 14049 TGCCACCAAGCGTTCAGCAAATGTT-GATTGTTGGTCAGAGATCCATCTTAACGCCCAAT 13991 Query 122855 TCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTC--AAATAACTGCTTCTTTTC 122912 ||||||||||| ||||| |||| ||| | ||| || || | | || | | || | Sbjct 13990 CCGCCTTCTTCTTGATACAGGGTATAGTGTCGATAGCATCGAAGAGAAATTCACGTTGGC 13931 Query 122913 -AGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCATT- 122970 ||| |||||| ||||| | || || | ||||||||||| ||| | || Sbjct 13930 GAGA---ATCCTTTATGTAGGTATCGATAAGGAGGGAATATGTTTCTGAATGGATGTTTT 13874 Query 122971 ---TCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCTCATCC 123027 ||||||| ||| | ||||||| ||||||||||| | || ||||| | Sbjct 13873 CCATCATTAT----TTGGAAACCGTAGAAGCAGCGCGCTTCGGCAACTTGTACCTCGTTA 13818 Query 123028 GCAAAATTGTTAT-TGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAG 123086 | ||||| | | | || |||||| ||||| |||||||| |||||||||| ||||| Sbjct 13817 G-AAAATCGCTCTACGAGATTCTCGTTGACAATGCCATCGGAAGCAGCAAAGAACGCCAG 13759 Query 123087 GATGTACTTTATGAATTTCTTTTCATTTTCATTCAGG-GTCT--TCCAGTCGTCAAGATC 123143 | || |||||| | |||||| || || ||| || | ||||||| | ||| || Sbjct 13758 AACGTGTGATATGAAGTGGCGTTCATTGTCGTTGAGGCGTTTGGTCCAGTCATGAAGGTC 13699 Query 123144 TTTGGACAAATCAACTTCTTCCGCAGTCCA 123173 || || | || | ||||| || ||||| Sbjct 13698 CTTAGAGAGGTCCATCTCTTCTGCCGTCCA 13669 Score = 84.2 bits (92), Expect = 3e-11 Identities = 275/418 (66%), Gaps = 12/418 (3%) Strand=Plus/Plus Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736 ||||| || ||| || | ||||| || || | ||| |||||||| |||| |||| Sbjct 12081 CCCTCGTCACGGCTTATCAACTCATTGGAATAGGTCAAACCGGGCATGAGGCCCCTCTTC 12140 Query 122737 TTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 122795 || | ||| |||| | |||| ||||| || || ||||| |||||||| ||| || || Sbjct 12141 TTGATCCAGAAAATTGACGCA-AATGATCCAGAAAAGAAAATACCCTCAACAGCAGCGAA 12199 Query 122796 CGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAA---CCATTTCATTGCCCA 122852 || | || | || || |||| |||| | |||| | |||| || |||||| Sbjct 12200 AGCGACGAGTCTCTCCGCAAAGGTT---GACTCTCTATCAGATATCCATCGCAGTGCCCA 12256 Query 122853 TTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTTTTC 122912 | |||||| | | |||||||||| || | || || ||| || | ||||| Sbjct 12257 ATCTGCCTTCCTTTTGATACATGGTATAGAATCCATAGCGGTAAACAAGCATTGTTTTTC 12316 Query 122913 AGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCATTT- 122971 |||||||||||| ||||||| || ||||| ||||| || || ||| Sbjct 12317 TTGCGGATCCTTAATGTAGGTGTCAATTAAAAGAGAATAGGTTTCCGAGTGCACATTTTC 12376 Query 122972 CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCTCATCCGCAA 123031 ||| || ||| || | ||||| | || |||||| ||| || || ||| | | Sbjct 12377 CATCAT-AATTTGGAATCCATAGAAGCATCGTGCTTCGGCTATTTGGACTTCA-CATGAG 12434 Query 123032 AATTGTTAT-TGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGGA 123088 ||| ||| | | ||| || ||||| |||||||| | ||||| || ||||||| Sbjct 12435 AATCGTTCTACCAGATTTTCGTTGACAATGCCATCGGATGCTGCAAAAAAAGCCAGGA 12492 >seq9433 Length=11862 Score = 87.8 bits (96), Expect = 2e-12 Identities = 313/485 (65%), Gaps = 26/485 (5%) Strand=Plus/Plus Query 110865 CTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCAT 110924 || |||||| ||| | || ||| |||| ||| || ||| ||||| | ||||||| Sbjct 1624 CTCCCCACAGGTCGTATTGCAGCTGGCCTTTGGATGCAGGACTGCCCTCCCAAGTTTCAT 1683 Query 110925 AGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTT 110984 | | |||||| ||| || | ||| || || ||||| | ||||||| || |||| Sbjct 1684 ATGGACCTTGAATTTCTGCAAGCTCAGCACTGGCTTCCAGTGCACCGTGATAAATTGTTT 1743 Query 110985 CAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAA-----ATGCGTAGCGGCA 111039 ||||||| | || | | |||||| || ||||||| || ||||| | | Sbjct 1744 CAAAGATTTGGATGTTGAGTTGCTTGGCGACAGGAGAATCAAACGGCATCCGTAGAGCC- 1802 Query 111040 CAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATT 111099 || || ||| || | |||||| ||||| | |||||| || | ||| ||||| || Sbjct 1803 ----ATGAAGGTATCGGCCAAACCTTGCACACCAATACCAATTGGCCGGTGGCGCATGTT 1858 Query 111100 AGACTTTCGCGCAGTCTC---AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATT 111156 ||| || || ||| || ||||||| | ||| ||||||||| | ||| || || Sbjct 1859 TGAC---CGACGAGCCTCGGGAATGGGATAATAGTTTATGTCAATGATGCCGTTGAGGTT 1915 Query 111157 TTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTC 111216 ||||| | ||| | | || || | || | | ||||| ||| || | Sbjct 1916 ACGAGTAACGACCTTGGCAACGTCGTGCAACTTGTGGAAGTCAAA--TGC---TCCAT-- 1968 Query 111217 ATTGACAT--ACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTA 111274 |||| || | |||| | || | |||||||| ||||||||||| || || ||| Sbjct 1969 -TTGATATGAAAGTTGGCAAAGCAAGGGATGCCAAGTTGCAAACAGCGGTTTCGTCCGGT 2027 Query 111275 TCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTT 111334 | ||| || | ||| || || |||||||| ||| || ||||| | || | | Sbjct 2028 GACGAGTATTCAATAATCTCACAGCACAAGTTGGAGGACTTGATGGTCCCAATATGTTGT 2087 Query 111335 TGGTT 111339 ||||| Sbjct 2088 TGGTT 2092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627950434344000