Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq4003 163 4e-35 seq2771 84.2 3e-11 >seq4003 Length=18687 Score = 163 bits (180), Expect = 4e-35 Identities = 348/508 (69%), Gaps = 19/508 (4%) Strand=Plus/Minus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 |||||||| ||||| ||||| || || ||||| || |||||||| || |||| ||| Sbjct 14168 CCCTCGTCGCGGGAAATGAGCTCGTTTGAGAACGTCAAGCCTGGCATAAGCCCCCTTTTC 14109 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 || | |||||| || | ||| |||||||||||||| || || || || ||||| Sbjct 14108 TTGAGCCAGAAGATAGACGCAAACGAGCCAGAGAAGAAAATGCCTTCAACTGCAGCGAAT 14049 Query 130154 GCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA---AACCACTTCATCGCCCAC 130210 || | | || |||||||| | || | | ||| | ||| | | |||||| Sbjct 14048 GCCACCAAGCGTTCAGCAAATG---TTGATTGTTGGTCAGAGATCCATCTTAACGCCCAA 13992 Query 130211 TGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG---TTCCTTCTTT 130267 | |||||| |||| |||||| || | || | ||| || || ||||| ||| | || Sbjct 13991 TCCGCCTTCTTCTTGATACAGGGTATAGTGTCGATAGCATCGAAGAGAAATTC--ACGTT 13934 Query 130268 TCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACCATT 130327 || | ||| || ||||| |||| || || ||||||||||| ||||| || Sbjct 13933 GGCGA-GAATCCTTTATGTAGGTATCGATAAGGAGGGAATATGTTTCTGAATGGATGTTT 13875 Query 130328 T-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCTGC 130386 | ||| || || || ||||||| ||||||||||| | |||||||| | | Sbjct 13874 TCCATCATTATTTGGAAAC-CGTAGAAGCAGCGCGCTTCGGCAACTTGTACCTCGT-TAG 13817 Query 130387 AAAATTGTTAT-TGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGA 130445 ||||| | | | || |||||| ||||| |||||||| ||||||| |||||||| | Sbjct 13816 AAAATCGCTCTACGAGATTCTCGTTGACAATGCCATCGGAAGCAGCAAAGAACGCCAGAA 13757 Query 130446 TATACTTTATGAATTTCTGTTCATTCTCGTTCAGG-GTCT--TCCAGTCGTCAAGATCCT 130502 | |||||| | ||||||| ||||| ||| || | ||||||| | ||| |||| Sbjct 13756 CGTGTGATATGAAGTGGCGTTCATTGTCGTTGAGGCGTTTGGTCCAGTCATGAAGGTCCT 13697 Query 130503 TCGAGAGATCTACCTCCTCCGCAGTCCA 130530 | ||||| || | ||| || || ||||| Sbjct 13696 TAGAGAGGTCCATCTCTTCTGCCGTCCA 13669 Score = 95.1 bits (104), Expect = 1e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 |||||||||||| || | ||||| || || || ||| |||||||| |||| |||| Sbjct 12081 CCCTCGTCACGGCTTATCAACTCATTGGAATAGGTCAAACCGGGCATGAGGCCCCTCTTC 12140 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 || | ||||||||| | |||||| ||||| ||||| || ||||| ||| ||||| Sbjct 12141 TTGATCCAGAAAATTGACGCAAATGATCCAGAAAAGAAAATACCCTCAACAGCAGCGAAA 12200 Query 130154 GCAAAGAGACGCTCAGCAAAGG 130175 || | ||| | ||| ||||||| Sbjct 12201 GCGACGAGTCTCTCCGCAAAGG 12222 >seq2771 Length=2090 Score = 84.2 bits (92), Expect = 3e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 117839 GAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAA 117898 ||| |||||||| |||||||| || |||| |||||| | || | |||||| || || Sbjct 1473 GAGATAGTACATTCCCGTCTTTAGGCCCTTCTTCCACCCGTAAAAATGCATGCTGGTTAA 1532 Query 117899 CTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATG-AAGC 117957 | | ||| |||||| | || | | |||||||||||| ||||||||| | || Sbjct 1533 TTGGCCGAGCGTTGGAGACTGCAAGTGTACGTTCATACTTTGACTCTGATCGATGTATGC 1592 Query 117958 GTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTGT 118017 | || || || || || | ||| | || | |||| |||| ||||| || ||| ||| Sbjct 1593 G-CCACGGTCAGCAGCGAGATCCAGGACCTTCTTCTGGCTGATCTCCCAAACGGTCTTGT 1651 Query 118018 AGAGGTTCTTAATATCATCTGGGAT 118042 ||| | ||| | ||| || ||||| Sbjct 1652 AGATGGCCTTGACATCGTCAGGGAT 1676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618354880728400