Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq4003 107 2e-18 seq8943 98.7 1e-15 seq9433 96.9 4e-15 seq6460 86.0 7e-12 >seq4003 Length=18687 Score = 107 bits (118), Expect = 2e-18 Identities = 348/526 (66%), Gaps = 17/526 (3%) Strand=Plus/Plus Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGA--AGACTC-TAAAT 94497 ||||| || |||||| | || ||||| ||||| | | || |||| | || | | || Sbjct 13669 TGGACGGCAGAAGAGATGGACCTCTCTAAGGACCTTCATGACTGGACCAAACGCCTCAAC 13728 Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557 || |||||| | |||||| | || | ||||| |||||||||| |||||||| ||| Sbjct 13729 GACAATGAACGCCACTTCATATCACACGTTCTGGCGTTCTTTGCTGCTTCCGATGGCATT 13788 Query 94558 GTTTTTGAGAATATCA-ATAACAACTTTGCTGATGAGGTGCAATCCTCTGAAGCGAGATC 94616 || |||||| || | | | | ||| || | ||||| ||| | |||||| | | Sbjct 13789 GTCAACGAGAATCTCGTAGAGCGATTTT-CTAACGAGGTACAAGTTGCCGAAGCGCGCTG 13847 Query 94617 CTTCTATGCGTATCAGTGTCATAATG-AAATGGTGCATGGGGAGACATACAGTAAACTCA 94675 |||||| | || || | || ||| ||| | ||| || ||||| || | Sbjct 13848 CTTCTACG-GTTTCCAAATAATGATGGAAAACATCCATTCAGAAACATATTCCCTCCTTA 13906 Query 94676 TAGACAAGTATATTAAGGATGGT-GCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACA 94734 | || | || || |||||| | || | ||| ||||| || || ||| | || Sbjct 13907 TCGATACCTACATAAAGGATTCTCGCCAACGTGAATTT-CTCTTCGATGCTATCGACACT 13965 Query 94735 GTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT---TGATACAAAGTCG 94791 | || ||||| | ||||| ||||||||||| | | ||| | ||| | | || Sbjct 13966 ATACCCTGTATCAAGAAGAAGGCGGATTGGGCGTTAAGATGGATCTCTGACCAACAATCA 14025 Query 94792 CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGT 94851 | |||||||| || | | ||||| || ||||| || || ||||||||||| Sbjct 14026 A---CATTTGCTGAACGCTTGGTGGCATTCGCTGCAGTTGAAGGCATTTTCTTCTCTGGC 14082 Query 94852 TCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 94910 || || |||| |||| | ||||||||||| | || || |||||||| | ||||| Sbjct 14083 TCGTT-TGCGTCTATCTTCTGGCTCAAGAAAAGGGGGCTTATGCCAGGCTTGACGTTCTC 14141 Query 94911 CAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCG 94956 |||||||| || || || |||||||| | ||| ||| || ||| Sbjct 14142 AAACGAGCTCATTTCCCGCGACGAGGGCATGCACACAGATTTCGCG 14187 Score = 100 bits (110), Expect = 3e-16 Identities = 147/204 (72%), Gaps = 8/204 (4%) Strand=Plus/Minus Query 94738 CCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT---TGATACAAAGTCGCGT 94794 || ||||| ||| ||| || |||||||| || ||| | ||||| | |||| Sbjct 12280 CCATGTATCAAAAGGAAGGCAGATTGGGCACTGCGATGGATATCTGATAGAGAGTCAA-- 12223 Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854 ||||||| ||| ||||| |||| || || |||||||||||| ||||| ||||| || Sbjct 12222 -CCTTTGCGGAGAGACTCGTCGCTTTCGCTGCTGTTGAGGGTATTTTCTTTTCTGGATCA 12164 Query 94855 TTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAA 94913 || |||| | |||| ||| |||||||| | || |||||||| ||| | || ||||| Sbjct 12163 TT-TGCGTCAATTTTCTGGATCAAGAAGAGGGGCCTCATGCCCGGTTTGACCTATTCCAA 12105 Query 94914 CGAGCTTATCTCTCGTGACGAGGG 94937 ||| | || ||||||||||| Sbjct 12104 TGAGTTGATAAGCCGTGACGAGGG 12081 >seq8943 Length=28445 Score = 98.7 bits (108), Expect = 1e-15 Identities = 181/261 (69%), Gaps = 12/261 (5%) Strand=Plus/Minus Query 169201 ATCCGTCATGATCATGAGACGACCATACCG-AAGCTCGGAAACATCTTGATAGTCCTTAC 169259 ||| ||||||| ||| | |||||| |||| ||||| | || ||| | |||||| || Sbjct 9136 ATCTGTCATGAGCATTAAACGACCGTACCTCAAGCTTG-AAGTATCATTATAGTCTTTGT 9078 Query 169260 CCTGTTGAAGACCCAAGATCTTCTTGAGATCGTTGAACTCTTGGTTTG-----ATGTGAG 169314 |||||||| |||| ||| ||||||| || | || |||| ||| || ||| Sbjct 9077 TGTGTTGAAGCCCCATGATTTTCTTGATATTTTGGACTTCTTCATTTTTCATTATTTGAT 9018 Query 169315 CTGTGTGACAGAGGCATCGCGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTA 169374 | |||| | || |||||||||||| || || || | ||||| || ||| | Sbjct 9017 C-GTGTCGC----GCCTCGCGAACATTCAAGAGTTTTCCTCGCAACGGGAACACGCCGAA 8963 Query 169375 GTGATCACGACCAACGACGGAGAGACCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTC 169434 | ||| || ||||| ||| |||||| || || || | | ||| |||||||| || || Sbjct 8962 ATTATCGCGTCCAACAACGCCGAGACCTGCTACAGCCAATGCCTTGGCCGAGTCTCCTTC 8903 Query 169435 GGTGACGATGAGCGTACATTT 169455 ||||| ||| || ||||| || Sbjct 8902 GGTGAGGATAAGAGTACAATT 8882 >seq9433 Length=11862 Score = 96.9 bits (106), Expect = 4e-15 Identities = 286/440 (65%), Gaps = 6/440 (1%) Strand=Plus/Minus Query 105149 AACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCT 105205 ||||| ||| | | ||||| | ||| | ||| ||| || ||| |||||| || Sbjct 1915 AACCTCAACGGCATCATTGACATAAACTATTATCCCATTCCCGAG---GCTCGTCGGTCA 1859 Query 105206 AATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTT 105265 || ||| | ||||| ||||||||| | ||||| || ||| | || ||| ||||| | Sbjct 1858 AACATGCGCCACCGGCCAATTGGTATTGGTGTGCAAGGTTTGGCCGATACCTTCATGGCT 1799 Query 105266 TGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACC 105325 || | |||||||| | || ||| || |||| | || ||||| || Sbjct 1798 CTACGGATGCCGTTTGATTCTCCTGTCGCCAAGCAACTCAACATCCAAATCTTTGAAACA 1739 Query 105326 ATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAA 105385 || ||||||| || || || || ||| | ||| | ||||| || | |||||||||||| Sbjct 1738 ATTTATCACGGTGCACTGGAAGCCAGTGCTGAGCTTGCAGAAATTCAAGGTCCATATGAA 1679 Query 105386 ACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAG 105445 || | ||||| ||| || || |||| ||| |||| || |||||| || | | Sbjct 1678 ACTTGGGAGGGCAGTCCTGCATCCAAAGGCCAGCTGCAATACGACCTGTGGGGAGTTACG 1619 Query 105446 ACCAAGCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGT 105505 | | | | | || ||||| | || || | | |||||| || ||||| | Sbjct 1618 CCGACGGATTTGTGGGATTGGGACACGCTTAAAGTAAATATCAAGAAGTTCGGTCTAAGA 1559 Query 105506 AACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAAT 105565 ||| ||| ||| | |||| ||||| || || || || || || ||||| ||| Sbjct 1558 AACTCGCTCGTCACGTCTCCCATGCCTACTGCATCTACGAGCCAGATGTTGGGATTCAAT 1499 Query 105566 GAATGCTTTGAACCCTACAC 105585 ||||| || || ||||| || Sbjct 1498 GAATGTTTCGAGCCCTATAC 1479 >seq6460 Length=17344 Score = 86.0 bits (94), Expect = 7e-12 Identities = 158/228 (69%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 7238 TACCAAGCCTCAACTTCGGAGATGTTTGGTAAAGTCCGAGAAACTCCACAAAACGAGGAG 7297 |||||||| ||||| ||||| | | ||| || || ||||| || |||| || Sbjct 5848 TACCAAGCATCAACCTCGGAACTCTATGGAAAGGTAGTGGAAACCCCTCAAAGTGAAAGC 5789 Query 7298 ACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGGCTCGTC 7357 || || ||||| || || || || || ||| | ||| | || | ||| |||| Sbjct 5788 ACGCCTTTCTATCCTCGATCTCCTTATGGTGTCGCGAAGTTATATGCGTACTGGATCGTT 5729 Query 7358 AAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAACCATGAA 7417 |||||||||||| ||||||| ||||||| ||| || ||||||||||| |||||| Sbjct 5728 GTTAATTACCGCGAGGCTTACGGCATGTTTGCCTGCAATGGCATCCTCTTCAATCATGAA 5669 Query 7418 TCACCGAGACGAGGTGCAGACTTT-GTCACAAAGAAGATTACCGAGGG 7464 || || ||||| | ||||| || |||| |||||| || |||| Sbjct 5668 AGCCCTAGGAGAGGT-CGCACTTTCGTTACAAGAAAGATTTCC-AGGG 5623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583185049003600