Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq4003 109 6e-19 seq9433 107 2e-18 >seq4003 Length=18687 Score = 109 bits (120), Expect = 6e-19 Identities = 116/148 (78%), Gaps = 4/148 (3%) Strand=Plus/Plus Query 59968 CATCATTTGCACAACGTCTCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGC 60026 || ||||||| |||| | | || || || ||| || ||||| || |||||||||||| Sbjct 14024 CAACATTTGCTGAACGCTTGGTGGCATTCGC-TGCAGTTGAAGGCATTTTCTTCTCTGGC 14082 Query 60027 TCGTTCTGTG-CTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTC 60085 ||||| || | |||| ||||||||||| || | || || ||||| ||| ||| ||||| Sbjct 14083 TCGTT-TGCGTCTATCTTCTGGCTCAAGAAAAGGGGGCTTATGCCAGGCTTGACGTTCTC 14141 Query 60086 CAACGAGCTGATTTCCCGGGACGAGGGC 60113 |||||||| |||||||| ||||||||| Sbjct 14142 AAACGAGCTCATTTCCCGCGACGAGGGC 14169 >seq9433 Length=11862 Score = 107 bits (118), Expect = 2e-18 Identities = 207/298 (69%), Gaps = 12/298 (4%) Strand=Plus/Plus Query 78864 CATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCT 78923 ||||||| |||||||| || || || || ||| | || || |||||||||||||| Sbjct 1802 CATGAAGGTATCGGCCAAACCTTGCACACCAATACCAATTGGCCGGTGGCGCATGTTTGA 1861 Query 78924 CTTTCGGGCCGCCTCGG---TCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTACG 78980 | || ||| |||| | || ||| |||| || |||| || ||| |||||||| Sbjct 1862 CCGACGAGCC---TCGGGAATGGGATAATAGTTTATGTCAATGATGCCGTTGAGGTTACG 1918 Query 78981 CGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAAATGATTTCCTTTGAT--G 79038 || |||||| | || |||| ||| ||| ||| ||||| || | | |||||| | Sbjct 1919 AGTAACGACCTTGGCAACGTCGTGCAACTTGTGGAAGTCAAA-TGCTC-CATTTGATATG 1976 Query 79039 AAAGTCGGTAG-GCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAAC 79097 ||||| || | ||| || ||||||| |||||| || || || |||||||| || Sbjct 1977 AAAGTTGGCAAAGCA-AGGGATGCCAAGTTGCAAACAGCGGTTTCGTCCGGTGACGAGTA 2035 Query 79098 CTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTG 79155 || || || || |||||| || || ||||||||||| || || | | |||||| Sbjct 2036 TTCAATAATCTCACAGCACAAGTTGGAGGACTTGATGGTCCCAATATGTTGTTGGTTG 2093 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 79387 AAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCC 79446 || || || |||||||| || || ||| || || || ||| | || || | ||| Sbjct 2427 AATAGATCAGGGATCCATAGAGCATAGAAAAGATCTCGCGCACGAACTTCTTCTTTGCCA 2486 Query 79447 TGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATG 79506 |||||| | || || ||||| || | | ||| || ||||||||||| ||||| ||| Sbjct 2487 TGGTTCTTTCTCAAGTCAAGAAATTCGAAAACGTCAGCATGCCACGGCTCAAGATAAATG 2546 Query 79507 GCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAA 79566 ||||| | ||| |||||| ||| ||||||| || || || || ||| || | | Sbjct 2547 GCGAATGCACCGGGCCGCTTGTTGCCACCCTGGTCAACATATCGTGCTGTGGCGTCGTAT 2606 Query 79567 ACTCGGAGCATGGGCACGATGCCGTCGG 79594 | || | ||||||||| || |||| || Sbjct 2607 GCGCGTAACATGGGCACAATACCGTTGG 2634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548453560341600