Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq9516 102 5e-17 seq6550 100 2e-16 >seq9516 Length=56271 Score = 102 bits (112), Expect = 5e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 34510 GTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCG 34569 |||||||| || || ||||| || || || || || || | ||||| ||||| || || Sbjct 47701 GTGCTCTCTTTCTGGATGTTGTAGTCAGAGAGCGTGCGGCCATCTTCGAGTTGCTTGCCA 47760 Query 34570 GCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTT 34629 ||||| |||| |||||| ||||| || || | ||||||||||| ||| || | || Sbjct 47761 GCAAAAATTAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTC-CTGAATCTTCGCCTT 47819 Query 34630 AACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGT 34688 ||| | ||| ||||| |||||| || | ||| ||||| || ||||| | || Sbjct 47820 GACGTTGTCAATGGTGTCCGAAGACTCCACCTCAAGGGTAATCGTCTTTCCGGTCAGTGT 47879 Query 34689 TTTCACAAAAATCTGCAT 34706 || |||||||||||||| Sbjct 47880 CTTGACAAAAATCTGCAT 47897 Score = 100 bits (110), Expect = 2e-16 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||| || | ||| ||||| ||||||||| ||||||||||| || || ||||| Sbjct 48184 AGACGCAAGACAAGATGAAGAGTTGACTCCTTTTGGATGTTATAATCCGAGAGAGTTCGG 48243 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 | ||||||||||| || |||||||| || | ||| |||||||| || || Sbjct 48244 CCATCTTCAAGTTGCTTGCCGGCAAAGATGAGACGTTGTTGGTCAGGGGG 48293 Score = 93.3 bits (102), Expect = 3e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| || || | ||| ||||| ||||||||| || |||||||| || Sbjct 47899 CCTCCACGAAGACGTAAGACAAGATGAAGAGTTGACTCCTTTTGGATATTATAATCCGAG 47958 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || ||||| | |||||||||||||| |||||||| || | ||| ||||| || || || Sbjct 47959 AGAGTTCGACCATCTTCAAGTTGTTTGCCGGCAAAAATGAGACGTTGTTGATCAGGGGG 48017 >seq6550 Length=14069 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | ||| || | || | |||||||||| ||||| ||||| || ||||| || Sbjct 9154 CCGCCACGAAGGCGAAGGACGAGATGGAGAGTGGATTCCTTCTGAATATTGTAATCCGAC 9095 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| |||||||| || ||||| || | ||||| |||||||| || Sbjct 9094 AGGGTACGACCATCTTCCAGTTGTTTTCCAGCAAAGATGAGGCGCTGCTGGTCCGGTGGG 9035 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658 | || || ||||| ||| ||| | || || | || ||||| |||||| Sbjct 9034 ATACCTTCTTTGTCC-TGAATTTTCGCCTTCACATTGTCGATGGTGTCAGAAGACTCCAC 8976 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||| || || || || || || | ||| ||||||||||| |||||| Sbjct 8975 CTCCAGCGTGATGGTCTTGCCCGTAAGCGTCTTCACAAAAATTTGCATG 8927 Score = 91.5 bits (100), Expect = 9e-14 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||||| || |||||||| | || ||||| |||||| |||||||||||||| || Sbjct 9425 GCCGCCTCGTAGGCGCAACACAAGGTGCAGAGTAGACTCCTTCTGAATGTTATAATCCGA 9484 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || | || || || ||||| ||||| || || || ||||| ||||| || || Sbjct 9485 AAGAGTACGGCCATCCTCGAGCTGTTTGCCGGCGAAGATCAATCGCTGCTGGTCAGGAGG 9544 Score = 87.8 bits (96), Expect = 1e-12 Identities = 161/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | |||||| | || | || ||||| ||| || || ||||| ||||| || Sbjct 10109 GCCGCCACGAAGACGAAGAACGAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGA 10050 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || | || || | || || || ||||| || | ||||| |||||||| || Sbjct 10049 AAGGGTGCGTCCATCCTCCAACTGCTTGCCAGCAAAAATGAGTCGCTGCTGGTCCGGAGG 9990 Query 34599 CACTCCCTCCTTGTC-TGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCC 34656 | || ||||| || ||| ||||| | ||| || || || |||||| | || Sbjct 9989 AATGCCTTCCTTATCCTGT-ATCTTC-GCTTTGACATTATCGATCGTGTCTGAGGATTCA 9932 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || | ||||||||||| || || | ||||| || || ||||||||| Sbjct 9931 ACCTCAAGAGTTATCGTTTTTCCTGTCAGGGTTTTAACGAAGATCTGCATG 9881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314689746380870