Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq6550 113 4e-20 >seq6550 Length=14069 Score = 113 bits (124), Expect = 4e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || ||||||||| || || ||||| ||||| || || | || |||||||| || ||| | Sbjct 9878 CGGCATGCAGATCTTCGTTAAAACCCTGACAGGAAAAACGATAACTCTTGAGGTTGAATC 9937 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 || ||| |||| || | |||||| || || || || || |||||||| || || || Sbjct 9938 CTCAGACACGATCGATAATGTCAAAGCGAAGATACAGGATAAGGAAGGCATTCCTCCGGA 9997 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 || ||||| | || | || ||||| || ||||| || | ||| |||| ||||| Sbjct 9998 CCAGCAGCGACTCATTTTTGCTGGCAAGCAGTTGGAGGATGGACGCACCCTTTCTGATTA 10057 Query 27164 CAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 |||||| || || ||||| || | || | ||| | ||| | || || ||| Sbjct 10058 CAACATCCAGAAAGAGTCTACTCTTCACCTCGTTCTTCGTCTTCGTGGCGGC 10109 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || ||||| || || || || |||||| | || || || || ||||| | || Sbjct 8927 CATGCAAATTTTTGTGAAGACGCTTACGGGCAAGACCATCACGCTGGAGGTGGAGTCTTC 8986 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | || || |||||||| ||||||||||| || ||||| || || Sbjct 8987 TGACACCATCGACAATGTGAAGGCGAAAATTCAGGACAAAGAAGGTATCCCACCGGACCA 9046 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||| | || | || || |||||| ||||||| || ||| | || |||||||| Sbjct 9047 GCAGCGCCTCATCTTTGCTGGAAAACAACTGGAAGATGGTCGTACCCTGTCGGATTACAA 9106 Query 27167 CATTCAAAAGGAGTCGAC 27184 ||||| ||||| || || Sbjct 9107 TATTCAGAAGGAATCCAC 9124 Score = 102 bits (112), Expect = 7e-17 Identities = 133/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| ||||| || ||| | || || || ||||| ||| | || Sbjct 9156 ATGCAGATTTTCGTCAAAACGCTGACAGGGAAGACCATCACGCTAGAAGTCGAATCTTCT 9215 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || ||||| || || ||||| |||||||| ||||| Sbjct 9216 GACACCATTGACAATGTCAAGGCGAAGATTCAGGATAAGGAAGGGATACCACCTGATCAG 9275 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || || ||||| | || || || || |||| || |||||| Sbjct 9276 CAGCGTCTGATCTTTGCTGGGAAACAGCTAGAGGATGGTCGCACTCTTTCAGACTACAAC 9335 Query 27168 ATTC 27171 |||| Sbjct 9336 ATTC 9339 Score = 84.2 bits (92), Expect = 2e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | ||||| | ||||| || ||||| || || ||||| |||||||| ||||| Sbjct 9713 CGACACCATTGACAATGTCAAGGCGAAGATTCAGGATAAGGAAGGGATACCACCTGATCA 9772 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | || || ||||| | || || || || |||| || ||||| Sbjct 9773 GCAGCGTCTGATCTTTGCTGGGAAACAGCTAGAGGATGGTCGCACTCTTTCAGACTACAA 9832 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| ||||| || ||| | || | || | ||||| || || ||||| Sbjct 9833 CATTCAGAAGGAATCTACCCTCCACCTCGTCCTTCGTTTACGTGGCGGCAT 9883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434861914972800