Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq9516 91.5 1e-13 seq6550 87.8 2e-12 >seq9516 Length=56271 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 39087 CGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCC 39146 |||||||||||| || || || || || | || || || | || || || || ||||| Sbjct 47700 CGTGCTCTCTTTCTGGATGTTGTAGTCAGAGAGCGTGCGGCCATCTTCGAGTTGCTTGCC 47759 Query 39147 CGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTT 39206 ||||| || |||||||||||||||| || | || ||| |||||| || ||| || Sbjct 47760 AGCAAAAATTAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTCGCCTT 47819 Query 39207 GAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCG 39265 || ||| | | | || || |||||||| || | || || | ||||| ||||| | Sbjct 47820 GA-CGTTGTCAATGGTGTCCGAAGACTCCACCTCAAGGGTAATCGTCTTTCCGGTCAGTG 47878 Query 39266 TTTTAACAAAGATTTGCAT 39284 | || ||||| || ||||| Sbjct 47879 TCTTGACAAAAATCTGCAT 47897 >seq6550 Length=14069 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| || ||| || || || ||||| ||||| | || || || | || || || || Sbjct 9131 ATGGAGAGTGGATTCCTTCTGAATATTGTAATCCGACAGGGTACGACCATCTTCCAGTTG 9072 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGT-CGGTGGGCACGCTCTCTTTGTCCATGATTT 39199 ||| || ||||| || || |||||||||| ||||||| | | ||||||||| |||| Sbjct 9071 TTTTCCAGCAAAGATGAGGCGCTGCTGGTCCGGTGGG-ATACCTTCTTTGTCCTGAATTT 9013 Query 39200 TCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259 || || | | | | || || |||||||| |||| |||||| | || |||| Sbjct 9012 TCGCCTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCCAGCGTGATGGTCTTGCCCG 8953 Query 39260 TCAGCGTTTTAACAAAGATTTGCAT 39284 | ||||| || ||||| |||||||| Sbjct 8952 TAAGCGTCTTCACAAAAATTTGCAT 8928 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 |||||| || || || ||||| | ||| || ||| | || || | ||| ||||| ||||| Sbjct 10073 CTCTTTCTGGATGTTGTAATCAGAAAGGGTGCGTCCATCCTCCAACTGCTTGCCAGCAAA 10014 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||| | || | || || || ||| || ||| ||||| | Sbjct 10013 AATGAGTCGCTGCTGGTCCGGAGGAATGCCTTCCTTATCCTGTATCTTCGCTTTGACATT 9954 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | ||| || || || || || | || || ||||||| ||||| |||||||| Sbjct 9953 ATCGATCGTGTCTGAGGATTCAACCTCAAGAGTTATCGTTTTTCCTGTCAGGGTTTTAAC 9894 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 9893 GAAGATCTGCAT 9882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429491207446070