Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq6550 116 3e-21 seq9516 98.7 7e-16 >seq6550 Length=14069 Score = 116 bits (128), Expect = 3e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| |||||||||||||| || ||||||||||| ||||| || ||||| ||| | Sbjct 9882 ATGCAGATCTTCGTTAAAACCCTGACAGGAAAAACGATAACTCTTGAGGTTGAATCCTCA 9941 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | ||| | || || || || ||||| | || || || || Sbjct 9942 GACACGATCGATAATGTCAAAGC-GAAGATACAGGATAAGGAAGGCATTCCTCCGGACCA 10000 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || ||||| ||||| || |||| || | |||||| | |||||||| Sbjct 10001 GCAGCGACTCATTTTTGCTGGCAAGCAGTTGGAGGATGGACGCACCCTTTCTGATTACAA 10060 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || |||||||| || Sbjct 10061 CATCCAGAAAGAGTCTAC 10078 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || || || || ||||| || || ||||| || || || || || | Sbjct 8928 ATGCAAATTTTTGTGAAGACGCTTACGGGCAAGACCATCACGCTGGAGGTGGAGTCTTCT 8987 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | |||| || |||||||||||| | || || || || Sbjct 8988 GACACCATCGACAATGTGAAGGCGAAAA-TTCAGGACAAAGAAGGTATCCCACCGGACCA 9046 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || ||||| || |||||||||||||| | || || | |||||||| Sbjct 9047 GCAGCGCCTCATCTTTGCTGGAAAACAACTGGAAGATGGTCGTACCCTGTCGGATTACAA 9106 Query 23790 CATACAAAAAGAGTCCAC 23807 || || || || ||||| Sbjct 9107 TATTCAGAAGGAATCCAC 9124 Score = 93.3 bits (102), Expect = 3e-14 Identities = 132/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| ||||| || || || || || ||||| || ||||| || || | Sbjct 9156 ATGCAGATTTTCGTCAAAACGCTGACAGGGAAGACCATCACGCTAGAAGTCGAATCTTCT 9215 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || | || ||| || || ||||| |||| || ||||| Sbjct 9216 GACACCATTGACAATGTCAAGGC-GAAGATTCAGGATAAGGAAGGGATACCACCTGATCA 9274 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || ||||| || ||||| || || || | |||||| | || ||||| Sbjct 9275 GCAGCGTCTGATCTTTGCTGGGAAACAGCTAGAGGATGGTCGCACTCTTTCAGACTACAA 9334 Query 23790 CAT 23792 ||| Sbjct 9335 CAT 9337 >seq9516 Length=56271 Score = 98.7 bits (108), Expect = 7e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||||||||| || || || || || ||||| ||||| || || || || || || | Sbjct 47898 AATGCAGATTTTTGTCAAGACACTGACCGGAAAGACGATTACCCTTGAGGTGGAGTCTTC 47839 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| | | || || ||| ||||| || || | || || || || Sbjct 47838 GGACACCATTGACAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCA 47779 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| |||| ||||| ||||| ||||| ||||| | ||||| | || ||||| Sbjct 47778 GCAGCGTCTAATTTTTGCTGGCAAGCAACTCGAAGATGGCCGCACGCTCTCTGACTACAA 47719 Query 23790 CATACAAAAAGAGTCCACATTACA 23813 ||| || |||||| ||| || || Sbjct 47718 CATCCAGAAAGAGAGCACGTTGCA 47695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337966798478120