Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq6550 152 1e-31 seq9516 98.7 2e-15 seq994 98.7 2e-15 seq22 86.0 1e-11 >seq6550 Length=14069 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| || |||||||||||||| || || | ||||||||| | || || Sbjct 9149 ACGAAGGCGAAGGACGAGATGGAGAGTGGATTCCTTCTGAATATTGTAATCCGACAGGGT 9090 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| || || || ||||| ||||| || || || ||||| || || ||||| Sbjct 9089 ACGACCATCTTCCAGTTGTTTTCCAGCAAAGATGAGGCGCTGCTGGTCCGGTGGGATACC 9030 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| ||||| || || || ||||||| ||||||||||| || | ||||| || | Sbjct 9029 TTCTTTGTCCTGAATTTTCGCCTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCCAG 8970 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| ||||||||||| | || || | || | |||||| Sbjct 8969 CGTGATGGTCTTGCCCGTAAGCGTCTTCACAAAAATTTGCAT 8928 >seq9516 Length=56271 Score = 98.7 bits (108), Expect = 2e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || |||||| || ||||| || || ||||||| || ||||| | | ||| Sbjct 48180 ACGGAGACGCAAGACAAGATGAAGAGTTGACTCCTTTTGGATGTTATAATCCGAGAGAGT 48239 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || |||||||| || ||||| || || ||||| || ||||||||||| || || |||| Sbjct 48240 TCGGCCATCTTCAAGTTGCTTGCCGGCAAAGATGAGACGTTGTTGGTCAGGGGGGATACT 48299 Query 225612 TTCCTTGTCTTGGATCTTT 225630 || || ||||| ||||| Sbjct 48300 ATCATTTTCTTGAGTCTTT 48318 >seq994 Length=2625 Score = 98.7 bits (108), Expect = 2e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 371365 AATGGTAATTTATGCATAGATAAACCAGGTACTCTCATATTAAATATCGTAGTAATAAAG 371424 |||||||||||||| | || | ||| ||||||||| || | ||| ||||||| Sbjct 1097 AATGGTAATTTATGTAATGACATTCCATTAGTTCTCATATTTAAAGTTGTACTAATAAAA 1038 Query 371425 TTTATAGCGCCTAGAAGAGAAGATATACCTGCAAGATGTAAACTAAATATTGCTAAATCG 371484 |||||||| |||| | ||||||| || || | ||||| ||||||||| |||||||| Sbjct 1037 TTTATAGCTCCTAATAATGAAGATACCCCAGCTAAATGTAGACTAAATATAGCTAAATCA 978 Query 371485 ACGGAACCGCCGGAGTGAGCTACAATAGAACTTAACGGCGGGTAAACTGTTCAGCCGGT 371543 || ||||| || || || | | ||| ||| || || |||||||| || || || Sbjct 977 ACTGAACCACCTGAATGTGATTGGATACCGGCTAAAGGAGGATAAACTGTCCATCCTGT 919 Score = 96.9 bits (106), Expect = 8e-15 Identities = 79/96 (82%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 |||||| || ||||| || ||||||||||||||||| | ||| ||||| || || || | Sbjct 1275 TTCAGGGTGCCCAAAGAACCAGAATAAATGTTGATATAAGATTGGATCACCACCTCCAGC 1216 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGT 370767 ||| ||| | || |||||||||||||||||||| || Sbjct 1215 TGGGTCATAGAAACTAGTATTAAAATTTCTATCTGT 1180 Score = 89.7 bits (98), Expect = 1e-12 Identities = 192/283 (68%), Gaps = 8/283 (3%) Strand=Plus/Plus Query 7447 TATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATTATAAGG 7506 |||||||| || | ||| |||| || || |||||| |||||| | | || || Sbjct 598 TATTTAATCTTCTCAGTATTTGCTGGGATGATTGGTACTGCTTTTTCTGTACTAATTAGA 657 Query 7507 TTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAACGTT 7566 ||||||||| || |||| ||| |||| | || || || ||| | | || || Sbjct 658 TTAGAATTATCTTCTCCTGGTGTTCAATTTTTACAAGGAGATCATCAATTATTTAATGTA 717 Query 7567 ATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCC--GGTTATGATAG 7624 || ||||| || || || ||| | |||||||||||| | |||||||| ||||| ||| Sbjct 718 ATAATTACAGCTCACGCTTTTATAATGATTTTCTTTATGGTTATGCCTGGGTTA--GTAG 775 Query 7625 GCGGTTTCGGAAATTGATTCGTTCC--TTTAATGATTGGTGCTCCTGATATGGCTTTTCC 7682 | || || || |||| || | || || | || ||| ||| |||||||| || || Sbjct 776 GTGGATTTGGTAATTATTTTTTACCAATTCATTG--CGGTAGTCCAGATATGGCATTCCC 833 Query 7683 AAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTA 7725 || || || ||||| || || ||| |||| || || ||| Sbjct 834 TAGACTAAATAATATTTCATTCTGGTTATTACCTCCATCATTA 876 >seq22 Length=1393 Score = 86.0 bits (94), Expect = 1e-11 Identities = 203/305 (67%), Gaps = 4/305 (1%) Strand=Plus/Minus Query 7429 AAGGAACTGGAAACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATA 7488 || ||| | | ||| | |||||||| |||| ||| | || || ||||| || Sbjct 451 AAAGAAATAGGAACTCTCTATTTAATTTTTGCAATTTTTGCAGGAATGATAGGAACAGCT 392 Query 7489 TTTTCTATGATTATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAAT 7548 |||||| | |||| || ||||||||| || |||| || |||||| || || || Sbjct 391 TTTTCTGTTCTTATTAGATTAGAATTATCTTCTCCAGGAGTTCAAATTTTACAAGGAGAT 332 Query 7549 AGCCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTT 7608 ||| | | |||||||| || | || || || || ||||||| |||||| | || Sbjct 331 CATCAATTATTTAACGTTATAATATCAGCTCACGCGTTCATTATGATCTTCTTTATGGTA 272 Query 7609 ATGCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTT--AATGATTGGTGCTC 7666 ||||| | | | |||| || || || || | ||| | ||| | | || ||| | Sbjct 271 ATGCCAGGTCTAGTAGGTGGATTTGGTAACTACTTCTTACCTATCCACTG--TGGAAGCC 214 Query 7667 CTGATATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTAT 7726 ||||||||||||| || || | || ||||| || || || |||| || || ||| Sbjct 213 CTGATATGGCTTTCCCTAGATTAAATAATATTTCATTCTGGTTGTTACCCCCATCATTAA 154 Query 7727 TTCTA 7731 ||||| Sbjct 153 TTCTA 149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192372448010660