Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq4003 154 2e-32 seq9433 109 8e-19 >seq4003 Length=18687 Score = 154 bits (170), Expect = 2e-32 Identities = 277/398 (70%), Gaps = 9/398 (2%) Strand=Plus/Plus Query 48174 CTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAAT 48233 || || || || || ||| | || | ||||||||| || || | || |||| ||| || Sbjct 12093 CTTATCAACTCATTGGAATAGGTCAAACCGGGCATGAGGCCCCTCTTCTTGATCCAGAAA 12152 Query 48234 ATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTC 48293 |||| ||| || |||||||||||||| || || || || || || || ||| | | || Sbjct 12153 ATTGACGCAAATGATCCAGAAAAGAAAATACCCTCAACAGCAGCGAAAGCG--ACGAGTC 12210 Query 48294 TCTCCGTAA---CTGGCT-TCGTTGTG-TATCCACCGTTGTGCCCAATCAGCCTTCTTCT 48348 |||||| || || || || | | |||||| || |||||||||| |||||| | | Sbjct 12211 TCTCCGCAAAGGTTGACTCTCTATCAGATATCCATCGCAGTGCCCAATCTGCCTTCCTTT 12270 Query 48349 TTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGC-TATCTTTA 48407 | | ||| || || | || ||||| |||| | | | |||||| |||| ||| ||| Sbjct 12271 TGATACATGGTATAGAATCCATAGCGGTAAACAAGCATTGTTTTTC-TTGCGGATCCTTA 12329 Query 48408 ACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGA 48467 | ||| || || ||||||||| ||| |||| ||||| | |||||| || || || Sbjct 12330 ATGTAGGTGTCAATTAAAAGAGAATAGGTTTCCGAGTGCACATTTTCCATCATAATTTGG 12389 Query 48468 AATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAA 48527 ||||| || || |||| ||||| | || || || || | |||||||| ||| | Sbjct 12390 AATCCATAGAAGCATCGTGCTTCGGCTATTTGGACTTCACATGAGAATCGTTCTACCAGA 12449 Query 48528 TTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGC 48565 || || || || || ||||| || |||||||| || Sbjct 12450 TTTTCGTTGACAATGCCATCGGATGCTGCAAAAAAAGC 12487 Score = 150 bits (166), Expect = 2e-31 Identities = 390/588 (66%), Gaps = 30/588 (5%) Strand=Plus/Minus Query 48122 CAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAA 48181 |||||| | |||| ||| || || ||||| || | || || || | ||| | Sbjct 14208 CAAATGGCTGAACAATAAGCACGCGAAATCTGTGTGCATGCCCTCGTCGCGGGAAATGAG 14149 Query 48182 TTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGC 48241 ||||| || || || | || ||||| || || | ||| |||||||| || || | ||| Sbjct 14148 CTCGTTTGAGAACGTCAAGCCTGGCATAAGCCCCCTTTTCTTGAGCCAGAAGATAGACGC 14089 Query 48242 GAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGT-AAGTCTCTCTCCGT 48300 || || ||||| ||||| |||||||| || || || ||||| ||| | || | Sbjct 14088 AAACGAGCCAGAGAAGAAAATGCCTTCAACTGCAGCGAATGCCACCAAGCGT---TCAGC 14032 Query 48301 AACTGGCTTCGTTGT--GT-----ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACA 48353 || || || |||| || ||||| | | |||||||| ||||||||||| | | Sbjct 14031 AAATG--TTGATTGTTGGTCAGAGATCCATCTTAACGCCCAATCCGCCTTCTTCTTGATA 13974 Query 48354 CAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTG----CTATCTTTAAC 48409 || || || || || ||||||| |||||||| || | ||| ||| || | Sbjct 13973 CAGGGTATAGTGTCGATAGCATCGAAGAGAAA----TTCACGTTGGCGAGAATCCTTTAT 13918 Query 48410 GTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAA 48469 ||| ||||| || | || ||| |||| || || || ||||| || || || || Sbjct 13917 GTAGGTATCGATAAGGAGGGAATATGTTTCTGAATGGATGTTTTCCATCATTATTTGGAA 13858 Query 48470 TCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATT 48529 ||||| || || | |||||| | | |||||||| || ||||||| || | | ||| Sbjct 13857 ACCGTAGAAGCAGCGCGCTTCGGCAACTTGTACCTCGTTAGAAAATCGCTCTACGAGATT 13798 Query 48530 CTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAA------ 48583 ||| || || || ||||| ||||||||| || || | || ||| || || Sbjct 13797 CTCGTTGACAATGCCATCGGAAGCAGCAAAGAACGCCAGAACGTGTGATATGAAGTGGCG 13738 Query 48584 ATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTC 48643 | || |||||| || | |||| ||||||||| | || || || | || | || Sbjct 13737 TTCATTGTCGTTG--AGGC-GTTTGGTCCAGTCATGAAGGTCCTTAGAGAGGTCCATCTC 13681 Query 48644 TTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 ||| || ||||| || || || || ||||| || ||||| | |||||| Sbjct 13680 TTCTGCCGTCCAGAAAGAGGCTTCGGCTTTCTTGTACATCTGCCATAT 13633 >seq9433 Length=11862 Score = 109 bits (120), Expect = 8e-19 Identities = 352/541 (65%), Gaps = 4/541 (1%) Strand=Plus/Plus Query 77166 CTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGC 77225 || ||||| || || | | |||||||| |||||| || || ||||| ||||| ||| Sbjct 1476 CTTGTATAGGGCTCGAAACATTCATTGAATCCCAACATCTGGCTCGTAGATGCAGTAGGC 1535 Query 77226 ATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATAT 77285 || || | | | | ||||| ||||| | |||| || |||| || Sbjct 1536 ATGGGAGACGTGACGAGCGAGTTTCTTAGACCGAACTTCTTGATATTTACTTTAAGCGTG 1595 Query 77286 TTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTA 77345 | ||||||||| | ||| | || ||| |||| || |||||||| || || || Sbjct 1596 TCCCAATCCCACAAATCCGTCGGCGTAACTCCCCACAGGTCGTATTGCAGCTGGCCTTTG 1655 Query 77346 CTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTC 77405 ||| || | | |||||||| || |||| |||| || || ||| ||| Sbjct 1656 GATGCAGGACTGCCCTCCCAAGTTTCATATGGACCTTGAATTTCTGCAAGCTCAGCACTG 1715 Query 77406 GCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTTC 77464 ||||||| ||| |||| |||||||||||| || || | | ||||| | |||| || | Sbjct 1716 GCTTCCAGTGCACCGTGATAAATTGTTTCAAAGATTTGGATGTTGAGTTGCTTG-GCGAC 1774 Query 77465 AATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAAT 77524 | | ||||||||| ||| | || |||| ||| || || || || || ||||| Sbjct 1775 AGGAGAATCAAACGGCATCCGTAGAGCCATGAAGGTATCGGCCAAACCTTGCACACCAAT 1834 Query 77525 ACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAAT 77584 |||||| || | || | | | || || ||| || ||||| |||||||| || || Sbjct 1835 ACCAATTGGCCGGTGGCGCATGTTTGACCGACGAGCCTCGGGAATGGGATAATAGTTTAT 1894 Query 77585 GTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAA 77644 ||| || || ||||| || | | ||| || || | ||||| | | || | || Sbjct 1895 GTCAATGATGCCGTTGAGGTTACGAGTAACGACCTTGGCAACGTCGTGCAACTTGTGGAA 1954 Query 77645 ATCAAATCTTCCATCT-ATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTG 77703 |||||| ||||| | ||| ||| || |||||| | ||||| | || ||||| | Sbjct 1955 GTCAAATGCTCCATTTGATATGAAAGTTG-GCAAAGCAAGGGATGCCAAGTTGCAAACAG 2013 Query 77704 C 77704 | Sbjct 2014 C 2014 Score = 96.9 bits (106), Expect = 5e-15 Identities = 161/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074 || |||||||| |||||||||||| || |||||||| | | | |||||| || || Sbjct 2427 AATAGATCAGGGATCCATAGAGCATAGAAAAGATCTCGCGCACGAACTTCTTCTTTGCCA 2486 Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134 |||||| | | || ||||| || | || |||| |||||| || || ||||| || Sbjct 2487 TGGTTCTTTCTCAAGTCAAGAAATTCGAAAACGTCAGCATGCCACGGCTCAAGATAAATG 2546 Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194 || | | || || || || || || ||||| || | ||||| || ||| | || Sbjct 2547 GCGAATGCACCGGGCCGCTTGTTGCCACCCTGGTCAACATATCGTGCTGTGGCGTCGTAT 2606 Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATA 78247 | | ||||| || | ||||||||| || ||||||||||| | ||| || Sbjct 2607 GCGCGTAACATGGGCACAATACCGTTGGAGTACCCATTTGTTCCGGCAATGTA 2659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694578579889600