Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq4003 138 2e-27 seq9433 104 3e-17 >seq4003 Length=18687 Score = 138 bits (152), Expect = 2e-27 Identities = 269/397 (68%), Gaps = 3/397 (1%) Strand=Plus/Plus Query 46663 CTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAAT 46722 || || || || || ||| | || | || ||||| || || | ||| |||| ||| || Sbjct 12093 CTTATCAACTCATTGGAATAGGTCAAACCGGGCATGAGGCCCCTCTTCTTGATCCAGAAA 12152 Query 46723 ATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTC 46782 || | ||| || |||||||||||||| || || || ||||| ||||| ||||| |||||| Sbjct 12153 ATTGACGCAAATGATCCAGAAAAGAAAATACCCTCAACAGCAGCGAAAGCGACGAGTCTC 12212 Query 46783 TCTCCGTAACTGGCATCATTATGA---ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTT 46839 || | | | | || ||| | ||||| | | |||||||| ||||| | || Sbjct 12213 TCCGCAAAGGTTGACTCTCTATCAGATATCCATCGCAGTGCCCAATCTGCCTTCCTTTTG 12272 Query 46840 ACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACA 46899 | ||| || || | || ||||| |||| | | | |||||| | ||| |||| Sbjct 12273 ATACATGGTATAGAATCCATAGCGGTAAACAAGCATTGTTTTTCTTGCGGATCCTTAATG 12332 Query 46900 TATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAAT 46959 || || || ||||||||| ||| |||| || || | ||||| || || || ||| Sbjct 12333 TAGGTGTCAATTAAAAGAGAATAGGTTTCCGAGTGCACATTTTCCATCATAATTTGGAAT 12392 Query 46960 CCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTC 47019 || || || |||| |||||| | || || || || | |||||||| || ||| Sbjct 12393 CCATAGAAGCATCGTGCTTCGGCTATTTGGACTTCACATGAGAATCGTTCTACCAGATTT 12452 Query 47020 TCATTCACTATTCCATCACTAGCAGCAAAAAATGCCA 47056 || || || || ||||| || |||||||| |||| Sbjct 12453 TCGTTGACAATGCCATCGGATGCTGCAAAAAAAGCCA 12489 >seq9433 Length=11862 Score = 104 bits (114), Expect = 3e-17 Identities = 177/257 (69%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933 || || || || || ||| ||||| || | ||||| |||||||||||||||||| Sbjct 2739 AGACCAATACCGCCGGCCGTTTTACTAATCATCGCACAATTCTTCAATGTGTCATAGATG 2798 Query 76934 CCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACA 76993 ||||| || || || ||||| || ||| || || | | |||| ||| Sbjct 2799 CCCTCGATCGAGTCTTCTTTCATGCAAACAAGGAAGCATGAACTGAGTTGAGGATTTGGC 2858 Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 ||||| ||||| || || || |||||||||||||| || | || || | ||||| Sbjct 2859 GTTCCGGCATTGAATAAGGTGGGAGATGCATGAGTAAAGTAACGCTCGGACATGAGATTA 2918 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 || || || ||||| || ||||| | |||||| || || ||||| ||||| | | Sbjct 2919 TAAGTCTCGATAACACGATCGATATCACTCCCATGAATACCGACGGCGACCCGCATAATC 2978 Query 77114 ATATGCTGAGGTCGTTC 77130 |||||||| ||||| || Sbjct 2979 ATATGCTGTGGTCGCTC 2995 Score = 95.1 bits (104), Expect = 2e-14 Identities = 163/234 (70%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 76610 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCT 76669 || |||||||| |||||||||||| || |||||||| | | | |||||| || || Sbjct 2427 AATAGATCAGGGATCCATAGAGCATAGAAAAGATCTCGCGCACGAACTTCTTCTTTGCCA 2486 Query 76670 GTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 76729 |||||| | | || || || || | || |||| |||||| || || ||||| || Sbjct 2487 TGGTTCTTTCTCAAGTCAAGAAATTCGAAAACGTCAGCATGCCACGGCTCAAGATAAATG 2546 Query 76730 GCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAA 76789 || | |||| || || || || || ||||| || | ||||| || ||| | || Sbjct 2547 GCGAATGCACCGGGCCGCTTGTTGCCACCCTGGTCAACATATCGTGCTGTGGCGTCGTAT 2606 Query 76790 ACTCTCAACATTGGAATAATGCCGTTAGATGTA-CCATTTGTTCCAGAAATATA 76842 | | ||||| || | ||| ||||| || ||| ||||||||||| | ||| || Sbjct 2607 GCGCGTAACATGGGCACAATACCGTTGGA-GTACCCATTTGTTCCGGCAATGTA 2659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712841807644800