Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq6550 116 9e-21 seq9516 93.3 1e-13 >seq6550 Length=14069 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| ||||| ||||| || || || || || |||||||| | | || | |||||| Sbjct 9139 AGGACGAGATGGAGAGTGGATTCCTTCTGAATATTGTAATCCGACAGGGTACGACCATCT 9080 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || || ||||| || | ||||||||||| | ||| ||||| || || Sbjct 9079 TCCAGTTGTTTTCCAGCAAAGATGAGGCGCTGCTGGTCCGGTGGGATACCTTCTTTGTCC 9020 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 |||||||| || ||| | || | | |||| ||| ||| || || || || || || Sbjct 9019 TGAATTTTCGCCTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCCAGCGTGATGGTC 8960 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||||| || |||||||| || | ||||| Sbjct 8959 TTGCCCGTAAGCGTCTTCACAAAAATTTGCAT 8928 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || ||||||||||||||||| |||||||||||||| | | || | ||||| Sbjct 10093 AGAACGAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGAAAGGGTGCGTCCATCC 10034 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || || || || || || | ||||||||||| | || |||||||| || Sbjct 10033 TCCAACTGCTTGCCAGCAAAAATGAGTCGCTGCTGGTCCGGAGGAATGCCTTCCTTATCC 9974 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||||| | || | ||||||| || || |||||||| || ||| Sbjct 9973 TGTATCTTCGCTTTGACATTATCGATCGTGTCTGAGGATTCAACCTCAAGAGTTATCGTT 9914 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || || ||||||| |||||| Sbjct 9913 TTTCCTGTCAGGGTTTTAACGAAGATCTGCAT 9882 >seq9516 Length=56271 Score = 93.3 bits (102), Expect = 1e-13 Identities = 103/136 (76%), Gaps = 1/136 (1%) Strand=Plus/Plus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 ||||||||||||||| ||||| ||||||||||| ||||| | | ||||| |||||||| Sbjct 48192 GACAAGATGAAGAGTTGACTCCTTTTGGATGTTATAATCCGAGAGAGTTCGGCCATCTTC 48251 Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 || || ||||| ||||| || | || ||||| | | ||| | || |||||||| Sbjct 48252 AAGTTGCTTGCCGGCAAAGATGAGACGTTGTTGGTCAGGGGGGATACTATCATTTTCTTG 48311 Query 152015 AAT-TTTTTGTTTGAC 152029 | | ||| | |||||| Sbjct 48312 AGTCTTTATCTTTGAC 48327 Score = 87.8 bits (96), Expect = 4e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAA 151972 |||||| ||||||||||| || | | || | |||||||| || || || || || Sbjct 47706 CTCTTTCTGGATGTTGTAGTCAGAGAGCGTGCGGCCATCTTCGAGTTGCTTGCCAGCAAA 47765 Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032 || || | ||||||||| | | || || ||||| || ||||| || ||||| | Sbjct 47766 AATTAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTT 47825 Query 152033 CTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCAC 152092 || | | |||| ||| ||| || ||||| ||||| || || || || || ||||| || Sbjct 47826 GTCAATGGTGTCCGAAGACTCCACCTCAAGGGTAATCGTCTTTCCGGTCAGTGTCTTGAC 47885 Query 152093 GAAGACCTGCATT 152105 || | ||||||| Sbjct 47886 AAAAATCTGCATT 47898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153667201211690