Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq9516 176 9e-39 seq6550 152 1e-31 seq7837 89.7 1e-12 >seq9516 Length=56271 Score = 176 bits (194), Expect = 9e-39 Identities = 167/212 (79%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 282890 TACCA-GATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCT 282948 ||||| | || |||||||| ||||| |||||||||||||||| |||||||||||||| | Sbjct 47687 TACCAAGGTGCAACGTGCTCTCTTTCTGGATGTTGTAGTCAGAGAGCGTGCGGCCATCTT 47746 Query 282949 CTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTT 283008 | ||||| || || ||||| || | ||| || ||||| ||||| ||||||||||| | Sbjct 47747 CGAGTTGCTTGCCAGCAAAAATTAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCT 47806 Query 283009 GGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCT 283068 | ||||| || || ||| | || || |||||||||| || || || || || ||||||| Sbjct 47807 GAATCTTCGCCTTGACGTTGTCAATGGTGTCCGAAGACTCCACCTCAAGGGTAATCGTCT 47866 Query 283069 TACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 | || |||| ||||| || || ||||||||| Sbjct 47867 TTCCGGTCAGTGTCTTGACAAAAATCTGCATT 47898 Score = 91.5 bits (100), Expect = 3e-13 Identities = 87/110 (79%), Gaps = 1/110 (1%) Strand=Plus/Plus Query 282994 TACCCT-CCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||| |||| ||||||||||| ||||| || |||| || ||||| || | ||| || Sbjct 48621 TACCCTTCCTTATCTTGGATCTTGGCTTTGACATTATCAATTGTGTCAGAGGATTCCACC 48680 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || ||||| ||||| ||||| | ||||| ||||| |||||||| || Sbjct 48681 TCAAGGGTGATGGTCTTTCCCGTGAGTGTCTTTACGAAAATCTGCATATT 48730 Score = 89.7 bits (98), Expect = 1e-12 Identities = 113/154 (73%), Gaps = 1/154 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || | || ||||| | || || ||||||||||| || || | Sbjct 48175 CCTCCACGGAGACGCAAGACAAGATGAAGAGTTGACTCCTTTTGGATGTTATAATCCGAG 48234 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || |||||||| || ||||| || ||||||||||| | ||||||||||||| || Sbjct 48235 AGAGTTCGGCCATCTTCAAGTTGCTTGCCGGCAAAGATGAGACGTTGTTGGTCAGGGGGG 48294 Query 282993 ATACCCTCCTTGTCTTGGATCTTT-GCTTTTACG 283025 |||| || || ||||| ||||| |||| ||| Sbjct 48295 ATACTATCATTTTCTTGAGTCTTTATCTTTGACG 48328 Score = 84.2 bits (92), Expect = 5e-11 Identities = 84/108 (78%), Gaps = 1/108 (1%) Strand=Plus/Plus Query 282994 TACCCT-CCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||| |||||||||||||||| || || || | || || || || || | ||| || Sbjct 48343 TACCCTTCCTTGTCTTGGATCTTAGCCTTGACATTGTCAATCGTATCGGAGGATTCAACC 48402 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || | || || ||||| || ||||||||||||||||| || |||||| Sbjct 48403 TCCAACGTAATGGTCTTTCCGGTCAAAGTCTTAACGAAAATTTGCATT 48450 >seq6550 Length=14069 Score = 152 bits (168), Expect = 1e-31 Identities = 143/182 (79%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 282918 ATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGT 282977 ||||||||||| | ||| ||||| ||||||||||| |||||||| |||||||||| ||| Sbjct 9337 ATGTTGTAGTCTGAAAGAGTGCGACCATCCTCTAGCTGTTTCCCAGCAAAGATCAGACGC 9278 Query 282978 TGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTG 283037 || || ||| || || || ||||| || || ||||| || || || | || || ||| Sbjct 9277 TGCTGATCAGGTGGTATCCCTTCCTTATCCTGAATCTTCGCCTTGACATTGTCAATGGTG 9218 Query 283038 TCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGC 283097 || |||| ||||||||| || ||||| ||||| || |||| || || ||||| |||||| Sbjct 9217 TCAGAAGATTCGACTTCTAGCGTGATGGTCTTCCCTGTCAGCGTTTTGACGAAAATCTGC 9158 Query 283098 AT 283099 || Sbjct 9157 AT 9156 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || ||||| || || || | || ||||| ||||||||||| |||| | Sbjct 10108 CCGCCACGAAGACGAAGAACGAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGAA 10049 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| |||||||| | || || || ||||| || | || || ||||| ||| Sbjct 10048 AGGGTGCGTCCATCCTCCAACTGCTTGCCAGCAAAAATGAGTCGCTGCTGGTCCGGAGGA 9989 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||| || || ||||| ||||| || ||||||| ||||| || | ||| || Sbjct 9988 ATGCCTTCCTTATCCTGTATCTTCGCTTTGACATTATCGATCGTGTCTGAGGATTCAACC 9929 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| ||||| || || |||| || |||||||| |||||||| Sbjct 9928 TCAAGAGTTATCGTTTTTCCTGTCAGGGTTTTAACGAAGATCTGCAT 9882 Score = 107 bits (118), Expect = 4e-18 Identities = 124/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| | ||||| || || || | || ||| || || ||||||||||| | | Sbjct 9880 CCGCCACGTAAACGAAGGACGAGGTGGAGGGTAGATTCCTTCTGAATGTTGTAGTCTGAA 9821 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| ||||||||||| |||||||| |||||||||| ||| || || ||| || Sbjct 9820 AGAGTGCGACCATCCTCTAGCTGTTTCCCAGCAAAGATCAGACGCTGCTGATCAGGTGGT 9761 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTC 283039 || || ||||| || || ||||| || || || | || || ||||| Sbjct 9760 ATCCCTTCCTTATCCTGAATCTTCGCCTTGACATTGTCAATGGTGTC 9714 >seq7837 Length=8239 Score = 89.7 bits (98), Expect = 1e-12 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 || |||||||||||||| ||||| || ||| | ||||| |||||||||| || || || Sbjct 4776 CCTTCCTTGTCTTGGATTTTTGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCA 4835 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCA 283104 || || || ||||| || || | ||||| ||||| || ||||| |||| Sbjct 4836 AGGGTAATGGTCTTTCCGGTGAGGGTCTTGACGAAGATTTGCATCTTCA 4884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046599856115060