Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq4003 136 4e-27 >seq4003 Length=18687 Score = 136 bits (150), Expect = 4e-27 Identities = 273/402 (68%), Gaps = 2/402 (0%) Strand=Plus/Plus Query 23542 CTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAAT 23601 || ||||| ||||| ||| | || || || ||||| | || | || || ||||| || Sbjct 12093 CTTATCAACTCATTGGAATAGGTCAAACCGGGCATGAGGCCCCTCTTCTTGATCCAGAAA 12152 Query 23602 ATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGT 23661 |||| ||||||||||| ||||||||||||||||||||||| || || || || || | | Sbjct 12153 ATTGACGCAAATGATCCAGAAAAGAAAATACCCTCAACAGCAGCGAAAGCGACGAGTC-T 12211 Query 23662 GTAC-CAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTT 23720 | | |||| |||| | |||||| |||||| || ||||| |||||| ||| Sbjct 12212 CTCCGCAAAGGTTGACTCTCTATCAGATATCCATCGCAGTGCCCAATCTGCCTTCCTTTT 12271 Query 23721 TACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTAT 23780 | ||| || | || || || | || | | |||||||| ||| | || Sbjct 12272 GATACATGGTATAGAATCCATAGCGGTAAACAAGCATTGTTTTTCTTGCGGATCCTTAAT 12331 Query 23781 ATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAA 23840 || || ||||||| | | ||| |||| || || | |||||| || ||| || || Sbjct 12332 GTAGGTGTCAATTAAAAGAGAATAGGTTTCCGAGTGCACATTTTCCATCATAATTTGGAA 12391 Query 23841 CCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATT 23900 ||||| || |||| ||||| | | ||| || ||| | |||| || | | ||| Sbjct 12392 TCCATAGAAGCATCGTGCTTCGGCTATTTGGACTTCACATGAGAATCGTTCTACCAGATT 12451 Query 23901 TTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAAC 23942 |||||| ||||| ||||| || ||||| ||||| || || Sbjct 12452 TTCGTTGACAATGCCATCGGATGCTGCAAAAAAAGCCAGGAC 12493 Score = 132 bits (146), Expect = 5e-26 Identities = 309/466 (66%), Gaps = 0/466 (0%) Strand=Plus/Minus Query 23500 AACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAA 23559 |||||||| || || ||||| || | ||| || || | ||| | || || || Sbjct 14198 AACAATAAGCACGCGAAATCTGTGTGCATGCCCTCGTCGCGGGAAATGAGCTCGTTTGAG 14139 Query 23560 AATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCG 23619 || || || |||||||| | || | ||| || | ||| || || | ||||| || || Sbjct 14138 AACGTCAAGCCTGGCATAAGCCCCCTTTTCTTGAGCCAGAAGATAGACGCAAACGAGCCA 14079 Query 23620 GAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTA 23679 || |||||||| || ||||| || || || ||||| | ||| | ||||||||| | Sbjct 14078 GAGAAGAAAATGCCTTCAACTGCAGCGAATGCCACCAAGCGTTCAGCAAATGTTGATTGT 14019 Query 23680 TAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCA 23739 | ||||| |||||| || | ||||| |||||| || | ||| || || || Sbjct 14018 TGGTCAGAGATCCATCTTAACGCCCAATCCGCCTTCTTCTTGATACAGGGTATAGTGTCG 13959 Query 23740 ATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAA 23799 || || | |||||||| || | ||| |||| || ||||| || || | Sbjct 13958 ATAGCATCGAAGAGAAATTCACGTTGGCGAGAATCCTTTATGTAGGTATCGATAAGGAGG 13899 Query 23800 CTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCT 23859 ||| |||| ||||| || ||||| || || || || || || || || | ||| Sbjct 13898 GAATATGTTTCTGAATGGATGTTTTCCATCATTATTTGGAAACCGTAGAAGCAGCGCGCT 13839 Query 23860 TCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCA 23919 || | | ||| || || ||| |||||| | | | ||| ||||| ||||| ||||| Sbjct 13838 TCGGCAACTTGTACCTCGTTAGAAAATCGCTCTACGAGATTCTCGTTGACAATGCCATCG 13779 Query 23920 CTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCAT 23965 |||||||||||| || ||||| | | ||| || || | ||||| Sbjct 13778 GAAGCAGCAAAGAACGCCAGAACGTGTGATATGAAGTGGCGTTCAT 13733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521420271746000