Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq6550 125 5e-24 seq9516 123 2e-23 seq6755 82.4 5e-11 >seq6550 Length=14069 Score = 125 bits (138), Expect = 5e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || ||| || |||||||||||||| | || ||| | || ||| Sbjct 10090 ACGAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGAAAGGGTGCGTCCATCCTCC 10031 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| || ||||| || | |||||||| || | ||| | |||||||| ||| | Sbjct 10030 AACTGCTTGCCAGCAAAAATGAGTCGCTGCTGGTCCGGAGGAATGCCTTCCTTATCCTGT 9971 Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| |||| | || | || ||||| | |||||| ||||| | || ||||| || Sbjct 9970 ATCTTC-GCTTTGACATTATCGATCGTGTCTGAGGATTCAACCTCAAGAGTTATCGTTTT 9912 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||| || ||||| || |||||||| |||||| Sbjct 9911 TCCTGTCAGGGTTTTAACGAAGATCTGCATG 9881 Score = 102 bits (112), Expect = 6e-17 Identities = 134/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 44156 ATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGC 44215 |||||||| || | || ||| | || || ||||| ||||| |||||||||| |||| Sbjct 9337 ATGTTGTAGTCTGAAAGAGTGCGACCATCCTCTAGCTGTTTCCCAGCAAAGATCAGACGC 9278 Query 44216 TGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGG 44273 |||||||| | || | |||||||| ||| |||||| ||| || ||| | |||| Sbjct 9277 TGCTGATCAGGTGGTATCCCTTCCTTATCCTGAATCTTCGCCTTGACATTGT--CAATGG 9220 Query 44274 TGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTT 44333 |||| | ||||| || || | ||| || ||||| || || || || || ||||| || | Sbjct 9219 TGTCAGAAGATTCGACTTCTAGCGTGATGGTCTTCCCTGTCAGCGTTTTGACGAAAATCT 9160 Query 44334 GCAT 44337 |||| Sbjct 9159 GCAT 9156 >seq9516 Length=56271 Score = 123 bits (136), Expect = 2e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 ||||| | ||||||||| || ||||||||||| || | ||| ||| | || || || Sbjct 47692 AGGTGCAACGTGCTCTCTTTCTGGATGTTGTAGTCAGAGAGCGTGCGGCCATCTTCGAGT 47751 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 ||||| || ||||| || | ||||||||| || | ||| | || ||||| ||| ||| Sbjct 47752 TGCTTGCCAGCAAAAATTAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATC 47811 Query 44252 TTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCC 44311 ||| ||| | | | |||||||| | || |||||||| | |||||||||||||| Sbjct 47812 TTCGCCTTGACGTTGTCAATGGTGTCCGAAGACTCCACCTCAAGGGTAATCGTCTTTCCG 47871 Query 44312 GTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||| || || || ||||| Sbjct 47872 GTCAGTGTCTTGACAAAAATCTGCAT 47897 >seq6755 Length=30522 Score = 82.4 bits (90), Expect = 5e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || || |||||||||||||||||| ||| ||| ||| |||| ||| Sbjct 24855 ACTAGGTGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGTTGAGGGTGCGGCCGTCCTCC 24914 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||||||| || || ||||||| ||||||||| || Sbjct 24915 AGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTC 24949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359944815090630