Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq6550 167 6e-36 seq9516 132 1e-25 seq2300 87.8 4e-12 seq7837 84.2 5e-11 >seq6550 Length=14069 Score = 167 bits (184), Expect = 6e-36 Identities = 161/207 (78%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| || |||||||||||||| || || ||||| ||| ||||||| Sbjct 9885 CAGATCTTCGTTAAAACCCTGACAGGAAAAACGATAACTCTTGAGGTTGAATCCTCAGAC 9944 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || |||||| ||||| ||||| || ||||| || |||||||||||||| Sbjct 9945 ACGATCGATAATGTCAAAGCGAAGATACAGGATAAGGAAGGCATTCCTCCGGACCAGCAG 10004 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| || || || || || ||| | || |||||| | || ||| | ||||| ||| || Sbjct 10005 CGACTCATTTTTGCTGGCAAGCAGTTGGAGGATGGACGCACCCTTTCTGATTACAACATC 10064 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || ||||| || || || || || ||| Sbjct 10065 CAGAAAGAGTCTACTCTTCACCTCGTT 10091 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| ||||| || || || || || || ||||| || |||||||| || ||| Sbjct 8931 CAAATTTTTGTGAAGACGCTTACGGGCAAGACCATCACGCTGGAGGTGGAGTCTTCTGAC 8990 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || || ||||||||||||||||| ||||| ||||||||||| Sbjct 8991 ACCATCGACAATGTGAAGGCGAAAATTCAGGACAAAGAAGGTATCCCACCGGACCAGCAG 9050 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || |||||||| || |||||||| | || || | ||||| || | Sbjct 9051 CGCCTCATCTTTGCTGGAAAACAACTGGAAGATGGTCGTACCCTGTCGGATTACAATATT 9110 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || || ||||| || Sbjct 9111 CAGAAGGAATCCACTCTCCATCTCGT 9136 Score = 122 bits (134), Expect = 2e-22 Identities = 133/177 (75%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| ||||| || ||||| || || ||||| || || || ||| || ||| Sbjct 9159 CAGATTTTCGTCAAAACGCTGACAGGGAAGACCATCACGCTAGAAGTCGAATCTTCTGAC 9218 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| ||||||||||| || ||||| || || || || ||||| Sbjct 9219 ACCATTGACAATGTCAAGGCGAAGATTCAGGATAAGGAAGGGATACCACCTGATCAGCAG 9278 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || ||||| || || |||||||| || ||||| | |||||| | || || ||| Sbjct 9279 CGTCTGATCTTTGCTGGGAAACAGCTAGAGGATGGTCGCACTCTTTCAGACTACAAC 9335 Score = 109 bits (120), Expect = 1e-18 Identities = 90/110 (82%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 178024 GAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGA 178083 |||||||||| |||||||| ||| | ||||||||||| ||||||||||| ||||| | | Sbjct 8386 GAATCCCTCCTGACCAGCAGCGATTGATCTTCGCCGGCAAACAGCTCGAGGATGGCCGTA 8445 Query 178084 CTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTG 178133 ||||| | ||||||||| | || || || || || ||||| ||||| ||| Sbjct 8446 CTCTTTCGGATTATAACATTCAGAAGGAGTCTACTCTGCACCTTGTGTTG 8495 Score = 109 bits (120), Expect = 1e-18 Identities = 90/110 (82%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 178024 GAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGA 178083 |||||||||| |||||||| ||| | ||||||||||| ||||||||||| ||||| | | Sbjct 9549 GAATCCCTCCTGACCAGCAGCGATTGATCTTCGCCGGCAAACAGCTCGAGGATGGCCGTA 9490 Query 178084 CTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTG 178133 ||||| | ||||||||| | || || || || || ||||| ||||| ||| Sbjct 9489 CTCTTTCGGATTATAACATTCAGAAGGAGTCTACTCTGCACCTTGTGTTG 9440 Score = 98.7 bits (108), Expect = 2e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 |||||||| || || ||||| ||||||||||| || ||||| || || || || ||| Sbjct 9714 GACACCATTGACAATGTCAAGGCGAAGATTCAGGATAAGGAAGGGATACCACCTGATCAG 9773 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || ||||| || || |||||||| || ||||| | |||||| | || || ||| Sbjct 9774 CAGCGTCTGATCTTTGCTGGGAAACAGCTAGAGGATGGTCGCACTCTTTCAGACTACAAC 9833 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 | || || ||||| || || || || || Sbjct 9834 ATTCAGAAGGAATCTACCCTCCACCTCGT 9862 >seq9516 Length=56271 Score = 132 bits (146), Expect = 1e-25 Identities = 142/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || || || || ||||| ||||| ||||| |||||||| || ||| Sbjct 47894 CAGATTTTTGTCAAGACACTGACCGGAAAGACGATTACCCTTGAGGTGGAGTCTTCGGAC 47835 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| |||||||||||||| || || || ||||| |||||||| Sbjct 47834 ACCATTGACAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAGCAG 47775 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || || || || || ||||||||||| | || || | || || ||| || Sbjct 47774 CGTCTAATTTTTGCTGGCAAGCAACTCGAAGATGGCCGCACGCTCTCTGACTACAACATC 47715 Query 178104 CAAAAAGA 178111 || ||||| Sbjct 47714 CAGAAAGA 47707 >seq2300 Length=1447 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| ||||| || || || || | |||||||| |||||| | || ||| Sbjct 1130 CAAATTTTTGTGAAGGGACTTACGGGCAAGAGTATCACCCTGGAGGTGAAGTCTTCTGAC 1071 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | ||| || | ||||| ||||||||||| || ||| || || || || ||| Sbjct 1070 ATCATTGACGATGTCAAGGCGAAGATTCAGGATAAGGAAAAGATACCACCTGATTGGCAG 1011 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || |||||||| || ||||| | |||||| | | || ||| | Sbjct 1010 CGTCTGATCTTTGCTGGGAAACAGCTGGAGGATGGGCGCACTCTTTCATACTACAACATT 951 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || || || || || Sbjct 950 CAGAAGGAATCCACCCTCCACCTCGT 925 >seq7837 Length=8239 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || ||||| ||||| || || ||||| |||||||| || ||| Sbjct 4876 CAAATCTTCGTCAAGACCCTCACCGGAAAGACCATTACCCTTGAGGTGGAGTCTTCGGAC 4817 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 |||||||| |||||||| ||| || || ||||| ||||| Sbjct 4816 ACCATCGACAACGTCAAGGCAAAAATCCAAGACAAGGAAGG 4776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203570957045660