Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20phalloides_20[genbank_20GCA_5F001983385.1_202017-02-02] 1,465 sequences; 40,385,187 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1428 192 8e-44 seq612 87.8 2e-12 >seq1428 Length=122432 Score = 192 bits (212), Expect = 8e-44 Identities = 381/561 (68%), Gaps = 6/561 (1%) Strand=Plus/Plus Query 42061 CAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGT 42120 || ||| ||||||||| ||||| ||||| || | || || || || |||||| | || Sbjct 81980 CAGACAAGCGAAATCGGTGTGCAACCCCTCGTCACGGCTTATCAACTCATTGGAATAAGT 82039 Query 42121 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAA 42180 | |||||||| || || | ||| || | ||| || || |||||||||||||||||||| Sbjct 82040 CAAACCGGGCATGAGACCTCTCTTCTTGATCCAGAAAATTGACGCAAATGATCCAGAAAA 82099 Query 42181 GAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACCG--GCACTGTC 42237 ||| || || || || || || || || | || ||||| || | || | || || Sbjct 82100 GAAAATGCCCTCAACGGCAGCGAAAGCGACGAGCCTCTCCGCAAAGGTCGACTCTCTATC 82159 Query 42238 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 42297 | |||||| | | |||||||| || ||| |||| | ||| || || | || ||||| Sbjct 82160 AGATATCCATCGTAGCGCCCAATCTGCTTTCCTTTTGATACATGGTATAGAATCCATGGC 82219 Query 42298 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATA 42357 |||| | | | |||||| | ||| |||| || || || || |||||| ||| Sbjct 82220 GGTAAACAAGCATTGTTTTTCTTGCGGATCCTTAATGTAGGTGTCAATTAAAAGAGAATA 82279 Query 42358 CATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGT 42417 | |||| || || | ||||| || || || ||||| |||||||||| || |||| Sbjct 82280 CGTTTCCGAGTGTACATTTTCCATCATAATTTGGAATCCATAGAAACATCGTGCTTCGGC 82339 Query 42418 AACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGC 42477 | || ||||| | || ||||| | | ||||||||| || || || ||| || Sbjct 82340 TATTTGGACTTCACATGAGAACCGTTCTACCAGATTTTCGTTGACAATGCCATCAGATGC 82399 Query 42478 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA---TTTATT 42534 |||||||| |||| || | ||| ||||| |||||| | |||| || | Sbjct 82400 CGCAAAAAAAGCCAGGACTCGAGATATGAAATAGCGTTCGTCTGCATTTAAGCGTTCAGA 82459 Query 42535 CCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGC 42594 |||||| || ||| | || | || | || ||| | ||||| ||||| |||| || Sbjct 82460 CCAATCTACGAGATCGTGCGAGAGGTCAATCTCCTCTGCAGTCCAGAATGAAGCTTGAGC 82519 Query 42595 CTTTTTATACATATTCCAGAT 42615 || ||||||| || ||| || Sbjct 82520 TTTCTTATACAAATGCCAAAT 82540 >seq612 Length=166524 Score = 87.8 bits (96), Expect = 2e-12 Identities = 179/265 (68%), Gaps = 6/265 (2%) Strand=Plus/Plus Query 72298 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 72357 || || || || || ||| ||||| || | ||| || | || || || ||||||||| Sbjct 67681 AGTCCAATACCACCGGCCGTTTTACTAATCATTGCACAACTCTTCAATGTGTCATAGATG 67740 Query 72358 CCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT- 72416 ||||| || |||||| ||||| || || | ||| || | | ||| || | Sbjct 67741 CCCTCAATCGAGTCATCCTTCATGCAAACAAGGA---AGCATGAACTGAGCTGAGGATTT 67797 Query 72417 --AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGA 72474 ||||| || || || ||||| ||||| || || ||||| | ||| |||| ||| Sbjct 67798 GGTGTTCCGGCGTTGAACAAGGTGGGAGATGCATGAGTAAAGTAACGTTCGGACATGAGA 67857 Query 72475 TTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATT 72534 || || ||||| ||| | || ||||| | | ||| || || || ||||| ||||| Sbjct 67858 TTATAAGTCTCGATAACACGATCAATATCACTTCCATGAATACCGACGGCGACCCGCATA 67917 Query 72535 AACATATGCTGAGGTCTTTCAACGA 72559 | ||||||| ||||| ||| ||| Sbjct 67918 ATCATATGCGCAGGTCGCTCAGCGA 67942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671126909763400