Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20phalloides_20[genbank_20GCA_5F001983385.1_202017-02-02] 1,465 sequences; 40,385,187 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1394 98.7 2e-15 seq606 84.2 5e-11 >seq1394 Length=14872 Score = 98.7 bits (108), Expect = 2e-15 Identities = 90/114 (79%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||| | |||||| ||||||||||| ||||| ||||| ||||| ||||| | ||||||| Sbjct 6526 GAGACGCAAAACGAGGTGAAGAGTCGACTCCTTTTGGATATTATAATCCGAGAGAGTTCG 6467 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 ||||| || || ||||| || || || || || ||||||||||| || || || Sbjct 6466 GCCATCCTCAAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCAGGGGGGAT 6413 Score = 93.3 bits (102), Expect = 9e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||| | |||||| |||||||| || || || ||||| ||||||||||| | || |||| Sbjct 6801 GAGACGCAAAACGAGGTGAAGGGTCGATTCCTTTTGGATATTGTAATCCGAGAGTGTTCG 6742 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 ||||| || || ||||| || || || || || ||||||||||| ||||| || Sbjct 6741 ACCATCCTCAAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCAGGAGGGAT 6688 Score = 93.3 bits (102), Expect = 9e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| | || ||||| || || || || || || || || || |||||| | | Sbjct 6968 CCATCCTGAAGTTGCTTGCCAGCAAAAATTAGACGCTGCACATCGGGCGGAATGTCCACC 6909 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 |||| || || || ||||||||| ||||||||||||||| || || |||||||| Sbjct 6908 TTGTTCTGGATCTTCGCCTTGACGTTGTCAATGGTGTCCGAAGACTCTACCTCAAGGGTG 6849 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 | ||||||||| |||| ||||| || || | ||||||| Sbjct 6848 ATCGTCTTTCCAGTCAGTGTTTTGACAAAAATTTGCATT 6810 Score = 89.7 bits (98), Expect = 1e-12 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||| | ||| ||||| |||||||| ||||| || || ||||||||||| | ||||| | Sbjct 6250 GAGACGCAAGACAAGATGAAGAGTCGACTCCTTCTGGATATTGTAATCCGAGAGAGTCCG 6191 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 ||||| ||||| ||||| || ||||| || | || || ||||| || ||||| Sbjct 6190 GCCATCCTCGAGTTGCTTGCCGGCGAAAATCAAACGCTGCTGGTCAGGGGGAAT 6137 Score = 84.2 bits (92), Expect = 5e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| | || ||||| || || || || || || || || || |||||| | | Sbjct 183 CCATCCTGAAGTTGCTTGCCAGCAAAAATTAGACGCTGCACATCGGGCGGAATGTCCACC 124 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 |||| || || || ||| ||| | ||||||||||||||| || || |||||||| Sbjct 123 TTGTTCTGGATCTTCGCCTTAACGCTGTCAATGGTGTCCGAAGACTCTACCTCAAGGGTG 64 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 | ||||||||| |||| ||||| || || | ||||||| Sbjct 63 ATCGTCTTTCCAGTCAGTGTTTTGACAAAAATTTGCATT 25 >seq606 Length=65811 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||||||||| |||||||| ||||| || || ||| ||| || | |||||||| Sbjct 30955 ACGAGGTGAAGAGTAGACTCTTTCTGAATGTTATAGTCGCTAAGCGTGCGGCCATCTTCC 30896 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 | |||||| || || || || || || |||||||| ||||| || Sbjct 30895 AACTGCTTTCCCGCAAAAATGAGGCGCTGTTGGTCAGGAGGGAT 30852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109460774683655