Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20phalloides_20[genbank_20GCA_5F001983385.1_202017-02-02] 1,465 sequences; 40,385,187 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1394 123 3e-23 seq645 93.3 5e-14 >seq1394 Length=14872 Score = 123 bits (136), Expect = 3e-23 Identities = 122/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| |||||||| || || || || ||||| || || |||||||| ||||| Sbjct 6810 AATGCAAATTTTTGTCAAAACACTGACTGGAAAGACGATCACCCTTGAGGTAGAGTCTTC 6869 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||||| || | ||||| || || ||| |||||| || ||||| || || Sbjct 6870 GGACACCATTGACAACGTCAAGGCGAAGATCCAGAACAAGGTGGACATTCCGCCCGATGT 6929 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATG 27562 ||||||||||||||||||||| |||||||| |||||| Sbjct 6930 GCAGCGTCTAATTTTTGCTGGCAAGCAACTTCAGGATG 6967 Score = 118 bits (130), Expect = 1e-21 Identities = 121/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| |||||||| || || || || ||||| || || |||||||| ||||| Sbjct 25 AATGCAAATTTTTGTCAAAACACTGACTGGAAAGACGATCACCCTTGAGGTAGAGTCTTC 84 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||||| | | ||||| || || ||| |||||| || ||||| || || Sbjct 85 GGACACCATTGACAGCGTTAAGGCGAAGATCCAGAACAAGGTGGACATTCCGCCCGATGT 144 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATG 27562 ||||||||||||||||||||| |||||||| |||||| Sbjct 145 GCAGCGTCTAATTTTTGCTGGCAAGCAACTTCAGGATG 182 Score = 118 bits (130), Expect = 1e-21 Identities = 101/125 (81%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 27509 GAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTA 27568 ||||||| || |||||||||||| | ||||| || || |||||||||||||||| || | Sbjct 6135 GAATTCCCCCTGACCAGCAGCGTTTGATTTTCGCCGGCAAGCAACTCGAGGATGGCCGGA 6194 Query 27569 CCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCG 27628 | || | || || ||| |||| ||||| || ||||||||||| ||||||||||| || | Sbjct 6195 CTCTCTCGGATTACAATATCCAGAAGGAGTCGACTCTTCATCTTGTCTTGCGTCTCCGTG 6254 Query 27629 GTGGA 27633 | ||| Sbjct 6255 GAGGA 6259 Score = 113 bits (124), Expect = 5e-20 Identities = 100/125 (80%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 27509 GAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTA 27568 |||| ||||| ||||| || ||||| |||||||| || |||||||| ||||||| ||| | Sbjct 6686 GAATCCCTCCTGACCAACAACGTCTCATTTTTGCCGGCAAGCAACTTGAGGATGGTCGAA 6745 Query 27569 CCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCG 27628 | || | || || ||| ||||||||||||| || ||||| || || |||||||| || | Sbjct 6746 CACTCTCGGATTACAATATCCAAAAGGAATCGACCCTTCACCTCGTTTTGCGTCTCCGTG 6805 Query 27629 GTGGA 27633 | ||| Sbjct 6806 GAGGA 6810 Score = 96.9 bits (106), Expect = 4e-15 Identities = 179/277 (65%), Gaps = 48/277 (17%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||||||||| || ||||| |||||||| || | |||||||| || Sbjct 6259 AATGCAAATTTTTGTCAAGACTCTAACCGGAAAGACTATCACGTTGGAGGTTGAATCCTC 6318 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGG---------------- 27508 ||||| || | ||| | |||||||| || || |||||||| | Sbjct 6319 TGATACGATCGACAATGTCAAGGCTAAGATCCAAGACAAGGAAGGGTACGTTAATCTATC 6378 Query 27509 --------------------------------GAATTCCTCCAGACCAGCAGCGTCTAAT 27536 | || || || ||||| || ||||| || Sbjct 6379 TTTGTCAAAGATAAAAACTCAATAAATCAATAGTATCCCCCCTGACCAACAACGTCTCAT 6438 Query 27537 TTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGA 27596 |||||| || |||||||| ||||||| || || || | || |||||| |||||||||| Sbjct 6439 TTTTGCCGGCAAGCAACTTGAGGATGGCCGAACTCTCTCGGATTATAATATCCAAAAGGA 6498 Query 27597 ATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 || |||||||| || || |||||||| || || ||| Sbjct 6499 GTCGACTCTTCACCTCGTTTTGCGTCTCCGTGGAGGA 6535 >seq645 Length=215164 Score = 93.3 bits (102), Expect = 5e-14 Identities = 96/123 (78%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 || || || |||||||||||||| || || ||||| ||||| || ||||||| || ||| Sbjct 157252 ATCCCACCTGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACC 157193 Query 27571 CT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGG 27629 || ||| |||||||| |||||||||| || || || || |||| | || ||||| || Sbjct 157192 CTCAGC-GACTATAACATCCAAAAGGAGTCAACCCTCCACTTAGTTCTTCGCCTTCGTGG 157134 Query 27630 TGG 27632 ||| Sbjct 157133 TGG 157131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570299956190800