Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20phalloides_20[genbank_20GCA_5F001983385.1_202017-02-02] 1,465 sequences; 40,385,187 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1394 102 2e-16 seq606 102 2e-16 seq645 93.3 1e-13 >seq1394 Length=14872 Score = 102 bits (112), Expect = 2e-16 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 |||||||| || ||||| || ||| || || ||||| ||||||||| ||| |||||| Sbjct 6085 CCTTCCTTATCTTGGATTTTGGCTTTGACATTATCGATTGTGTCAGAGGATTCCACCTCG 6026 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| |||||||||||||| |||||||| || | |||||| Sbjct 6025 AGGGTGATGGTCTTTCCCGTGAGCGTCTTTACGAAAATCTGCAT 5982 Score = 96.9 bits (106), Expect = 8e-15 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 || ||||||||||| ||||| |||||||| |||||||||| || || | ||||| || Sbjct 6516 ACGAGGTGAAGAGTCGACTCCTTTTGGATATTATAATCCGAGAGAGTTCGGCCATCCTCA 6457 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 || |||||||| || || || || |||||||||||||| || Sbjct 6456 AGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCAGGGGG 6416 Score = 91.5 bits (100), Expect = 3e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 ||||||||||| |||||||| || || || ||||| || |||||| ||||||||| Sbjct 6363 CCTTCCTTGTCTTGGATCTTAGCCTTGACATTGTCGATCGTATCAGAGGATTCAACCTCC 6304 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 | ||||| |||||||| || |||||||| ||||| | |||||| Sbjct 6303 AACGTGATAGTCTTTCCGGTTAGAGTCTTGACAAAAATTTGCATT 6259 Score = 89.7 bits (98), Expect = 1e-12 Identities = 98/129 (76%), Gaps = 1/129 (1%) Strand=Plus/Minus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 || |||||||| || || || |||||||| || ||||||| || || | ||||| || Sbjct 6791 ACGAGGTGAAGGGTCGATTCCTTTTGGATATTGTAATCCGAGAGTGTTCGACCATCCTCA 6732 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 || |||||||| || || || || ||||||||||||||||| | | || || | | | | Sbjct 6731 AGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCAGGAGGGA-TTCTACCGTTTTATTG 6673 Query 211026 ATCTTTTGT 211034 | ||||||| Sbjct 6672 AGCTTTTGT 6664 Score = 84.2 bits (92), Expect = 5e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||| | || |||||||| || || || || || || || || |||| | || Sbjct 6968 CCATCCTGAAGTTGCTTGCCAGCAAAAATTAGACGCTGCACATCGGGCGGAATGTCCACC 6909 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 |||| ||||||||| || ||||| || |||||||| || || ||||| || ||| Sbjct 6908 TTGTTCTGGATCTTCGCCTTGACGTTGTCAATGGTGTCCGAAGACTCTACCTCAAGGGTG 6849 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||||||||| || || || || ||||| | |||||| Sbjct 6848 ATCGTCTTTCCAGTCAGTGTTTTGACAAAAATTTGCATT 6810 >seq606 Length=65811 Score = 102 bits (112), Expect = 2e-16 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||||||||| |||||||| || |||||||| || ||| || | |||||| Sbjct 30958 AGGACGAGGTGAAGAGTAGACTCTTTCTGAATGTTATAGTCGCTAAGCGTGCGGCCATCT 30899 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 |||| |||||| || || || || ||||| |||||||||||||| Sbjct 30898 TCCAACTGCTTTCCCGCAAAAATGAGGCGCTGTTGGTCAGGAGG 30855 >seq645 Length=215164 Score = 93.3 bits (102), Expect = 1e-13 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | ||| || || ||||| |||||||||||||| || ||||| Sbjct 157136 ACGAAGGCGAAGAACTAAGTGGAGGGTTGACTCCTTTTGGATGTTATAGTCGCTGAGGGT 157195 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 | ||||| |||||||||||||| |||||||| || || || |||||||| || Sbjct 157196 GCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGTGG 157249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159130242354725