Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20brassicae_20[genbank_20GCA_5F001600295.1_202016-03-01] 16 sequences; 23,647,732 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq4 95.1 1e-14 >seq4 Length=2369537 Score = 95.1 bits (104), Expect = 1e-14 Identities = 230/343 (67%), Gaps = 4/343 (1%) Strand=Plus/Plus Query 145926 CGGGTTCCAGGCGGTGAGGACGAGCCTCCTG-CTCTCGGGGTTCCTCTTGATCTCCCCTA 145984 ||||||||| || |||| |||| || |||| || ||||| || | |||| | Sbjct 836278 CGGGTTCCAAGCACTGAGCACGATCCGCCTGTCTGTCGGG-TTATGCACAATCTTGTGGA 836336 Query 145985 TCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTC-CACGTAC 146043 ||| ||| ||||||||| || || ||||| || || ||| | | | | |||| Sbjct 836337 TCACCTCCTGGAGCTGGTCGACCCCTTGCCCTGCATAGTC-GTCGTCGGCTGTCTTGTAC 836395 Query 146044 GCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTG 146103 | |||||||| || | ||||||||| ||||| ||||| ||||||||||| | || | Sbjct 836396 TCCGCCCCGAAATGGCGCCACTGGAAGCCGTACACGGGTCCCAGGTCCCCTTCCCTCCGG 836455 Query 146104 TGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACG 146163 || |||||||| | | || | |||| | |||||| |||||||||| | || Sbjct 836456 TGGCCCAGCCCCACTTTATCCAGATACTCCCTGCTCCCGTTCCCGTCCCAGATATGCACA 836515 Query 146164 CCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCG 146223 ||| || | || | | ||| ||| | || | ||||| |||||||| || Sbjct 836516 CCCTTCTGAGCCAGTTTCGCGCCGTCGGTGCAGCCGGACACAAACCACAGCAGCTCCTCA 836575 Query 146224 AGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 | ||| || | | ||||| | ||||||||||| || |||| Sbjct 836576 ATGACGCCGCGCGTAAAGACGCGCTTGGTGGTCAAGAGCGGGA 836618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076681984640