Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20brassicae_20[genbank_20GCA_5F001600295.1_202016-03-01] 16 sequences; 23,647,732 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq4 111 1e-19 >seq4 Length=2369537 Score = 111 bits (122), Expect = 1e-19 Identities = 186/269 (69%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 21237 AGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAA 21296 |||||||| ||||| || || | |||| | ||||||| | ||||||||||||| ||| Sbjct 836348 AGCTGGTCGACCCCTTGCCCTGCATAGTCGTCGTCGGCTGTCTTGTACTCCGCCCCGAAA 836407 Query 21297 TGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCCCCGAAGCCC 21356 || | ||||||||| |||||||| || ||||| || || || | |||| || | ||| Sbjct 836408 TGGCGCCACTGGAAGCCGTACACGGGTCCCAGGTCCCCTTCCCTCCGGTGGCCCAGCCCC 836467 Query 21357 TGCGCCGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGCCGCGGCGCGAC 21416 ||| | | | | | ||||| | ||||||| || | || || | | | Sbjct 836468 ACTTTATCCAGATACTCCCTGCTCCCGTTCCCGTCCCAGATATGCACACCCTTCTGAGCC 836527 Query 21417 AGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCCTCCACGACGCCCCTC 21476 |||| | | ||||||| |||| | ||||||||||| |||||| | |||||| | | Sbjct 836528 AGTTTCGCGCCGTCGGTGCAGCCGGACACAAACCACAGCAGCTCCTCAATGACGCCGCGC 836587 Query 21477 CAAAACACCCTTTTGGTGGTTAACAGAGG 21505 ||| || | |||||||| || || || Sbjct 836588 GTAAAGACGCGCTTGGTGGTCAAGAGCGG 836616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427775916583680