Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20brassicae_20[genbank_20GCA_5F001600295.1_202016-03-01] 16 sequences; 23,647,732 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq12 87.8 2e-12 >seq12 Length=785499 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || || || || || |||||||| || || |||| ||| ||||| || |||||| Sbjct 768063 GTCGACTCCTTCTGAATGTTGTAGTCCGACAGCGTGCGGCCGTCCTCGAGCTGCTTACCA 768004 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 ||| ||||||| || ||||| || ||||| ||||| || ||||| || || || Sbjct 768003 GCAAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTG 767944 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | ||||||| | || || |||| || | |||||||||||| | || Sbjct 767943 ACGTTGTCGATGGTGTCCGACGACTCGACCTCAAGCGTGATCGTCTTGCCGGTGAGAGTC 767884 Query 143168 TTTACGAATATTTGCATA 143185 || ||||| || |||||| Sbjct 767883 TTGACGAAGATCTGCATA 767866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507014298597120