Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20brassicae_20[genbank_20GCA_5F001600295.1_202016-03-01] 16 sequences; 23,647,732 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 2e-11 >seq3 Length=2410059 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 21138 GACGTTGCCCAGATCGCCGACGTGCCGCTCTGCGGCGTCGGGAGCGCCGTGATTTTGGTG 21197 ||||||||| || || |||||||| ||||| |||||||||||||| ||||| || | || Sbjct 1169726 GACGTTGCCGAGGTCACCGACGTGACGCTCGGCGGCGTCGGGAGCTCCGTGGTTCTTGTT 1169785 Query 21198 CGTAGGGTTAAAGTGCTCGCCGGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAACTCGTG 21257 | |||||| | || | || ||||| | |||||| ||| ||| ||||| |||| Sbjct 1169786 CTGGGGGTTATAATGGGCCCCAGCGGAGGCACAGCCGCCGCTCAAGTCACCGAAAGCGTG 1169845 Query 21258 AACGTG 21263 || || Sbjct 1169846 CACCTG 1169851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414572719158304