Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20brassicae_20[genbank_20GCA_5F001600295.1_202016-03-01] 16 sequences; 23,647,732 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq4 82.4 5e-11 >seq4 Length=2369537 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 25781 TGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTT 25840 ||||||| || ||||||| | ||||||||| |||||||| ||||| ||||| || || Sbjct 836391 TGTACTCCGCCCCGAAATGGCGCCACTGGAAGCCGTACACGGGTCCCAGGTCCCCTTCCC 836450 Query 25841 CCCTGTGCTCAAAGCCCCTCTT-ATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATC 25899 || ||| | | ||||| ||| ||||| | | || ||| || || |||||||||| Sbjct 836451 TCCGGTGGCCCA-GCCCCACTTTATCCAGATACTCCCTGCTCCCGTTCCCGTCCCAGATA 836509 Query 25900 TTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGC 25959 | || ||||||| | || | | || ||| | || || |||||||||||| Sbjct 836510 TGCACACCCTTCTGAGCCAGTTTCGCGCCGTCGGTGCAGCCGGACACAAACCACAGCAGC 836569 Query 25960 TCCGCCGTGACG 25971 ||| | ||||| Sbjct 836570 TCCTCAATGACG 836581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340137533673168