Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20brassicae_20[genbank_20GCA_5F001600295.1_202016-03-01] 16 sequences; 23,647,732 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq12 93.3 3e-13 >seq12 Length=785499 Score = 93.3 bits (102), Expect = 3e-13 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 480606 AGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGA 480665 ||||| | | ||| || || |||||||| || || || || || || || || |||||| Sbjct 767805 AGAGTACGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGA 767746 Query 480666 ATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTT 480725 || || |||||||| |||||||| ||||| || ||||| || | | | | Sbjct 767745 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATAGTGTCGGAGGACTCAACT 767686 Query 480726 TCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || ||||| || || |||||||||||||| |||||||| || Sbjct 767685 TCCAGAGTAATGGTCTTTCCGGTGAGAGTCTTGACGAAAATCTG 767642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268178513682368