Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20brassicae_20[genbank_20GCA_5F001600295.1_202016-03-01] 16 sequences; 23,647,732 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq12 82.4 7e-11 >seq12 Length=785499 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || || || || || |||||||| || || |||| ||| ||||| || |||||| Sbjct 768063 GTCGACTCCTTCTGAATGTTGTAGTCCGACAGCGTGCGGCCGTCCTCGAGCTGCTTACCA 768004 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| ||||||| || ||||| || ||||| ||||| || ||||| || || || Sbjct 768003 GCAAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTG 767944 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||||| | | || || |||| || | |||||||||||| | || Sbjct 767943 ACGTTGTCGATGGTGTCCGACGACTCGACCTCAAGCGTGATCGTCTTGCCGGTGAGAGTC 767884 Query 137395 TTTACGAATATTTGCATA 137412 || ||||| || |||||| Sbjct 767883 TTGACGAAGATCTGCATA 767866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488543902291200