Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20brassicae_20[genbank_20GCA_5F001600295.1_202016-03-01] 16 sequences; 23,647,732 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq12 89.7 5e-13 >seq12 Length=785499 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||| || ||||| ||| |||||||| || |||| Sbjct 767832 GACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGGCCATCCTCGAGCTGCTTTCCGGCG 767773 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || ||||| || || ||||| ||||| || || || ||| || || | Sbjct 767772 AAGATCAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACG 767713 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||| |||| | ||| ||||| | || | || || || || ||||| || Sbjct 767712 TTGTCGATAGTGTCGGAGGACTCAACTTCCAGAGTAATGGTCTTTCCGGTGAGAGTCTTG 767653 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 767652 ACGAAAATCTGCAT 767639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476611104677760