Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20brassicae_20[genbank_20GCA_5F001600295.1_202016-03-01] 16 sequences; 23,647,732 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq4 109 4e-19 >seq4 Length=2369537 Score = 109 bits (120), Expect = 4e-19 Identities = 162/227 (71%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 30231 TGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTT 30290 ||||||| || |||||||| | ||||||||| |||||||| ||||||||||| || || Sbjct 836391 TGTACTCCGCCCCGAAATGGCGCCACTGGAAGCCGTACACGGGTCCCAGGTCCCCTTCCC 836450 Query 30291 CCCTGTGCTCGAAGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATC 30349 || ||| | |||||| | || |||| | | || ||| ||||| |||||||||| Sbjct 836451 TCCGGTG-GCCCAGCCCCACTTTATCCAGATACTCCCTGCTCCCGTTCCCGTCCCAGATA 836509 Query 30350 TTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGC 30409 | || ||||||| || || | | || ||| | || || |||||||||||| Sbjct 836510 TGCACACCCTTCTGAGCCAGTTTCGCGCCGTCGGTGCAGCCGGACACAAACCACAGCAGC 836569 Query 30410 TCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 ||||| | |||| | | |||||| | |||||| || | ||| || Sbjct 836570 TCCTCAATGACGCCGCGCGTAAAGACGCGCTTGGTGGTCAAGAGCGG 836616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406310320769472