Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20brassicae_20[genbank_20GCA_5F001600295.1_202016-03-01] 16 sequences; 23,647,732 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq4 93.3 3e-14 >seq4 Length=2369537 Score = 93.3 bits (102), Expect = 3e-14 Identities = 151/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074 ||||||| | ||||||||| |||||||| ||||||||||| || || || ||| | Sbjct 836403 CGAAATGGCGCCACTGGAAGCCGTACACGGGTCCCAGGTCCCCTTCCCTCCGGTG-GCCC 836461 Query 30075 AGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTC 30133 |||||| | || |||| | | || ||| ||||| |||||||||| | || |||||| Sbjct 836462 AGCCCCACTTTATCCAGATACTCCCTGCTCCCGTTCCCGTCCCAGATATGCACACCCTTC 836521 Query 30134 TCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACG 30193 | | || | | || ||| | || || ||||||||||||||||| | |||| Sbjct 836522 TGAGCCAGTTTCGCGCCGTCGGTGCAGCCGGACACAAACCACAGCAGCTCCTCAATGACG 836581 Query 30194 GCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30228 | | |||||| | |||||| || | ||| || Sbjct 836582 CCGCGCGTAAAGACGCGCTTGGTGGTCAAGAGCGG 836616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406163120798176