Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20brassicae_20[genbank_20GCA_5F001600295.1_202016-03-01] 16 sequences; 23,647,732 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq5 105 3e-18 >seq5 Length=1777877 Score = 105 bits (116), Expect = 3e-18 Identities = 149/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 31076 GCGATCTGGTCTGTGAGCCGTTCCTGCACTTGCAGGCGGCGAGCATACATGTCCGCCAGG 31135 |||| ||| | ||||| || ||||| || ||||||||||||| | || | || || | Sbjct 761036 GCGACCTGCTTGGTGAGGCGCTCCTGGACCTGCAGGCGGCGAGAAAACGTCTCGGCAATA 761095 Query 31136 CGGGACAGCTTGCTCAGGCCCACGATACGACC--GTTCGGAATGTAGCTGATCGTGACCG 31193 || | |||||||| || || | || |||| | ||| || ||||||| ||| | || | Sbjct 761096 CGCGCGAGCTTGCTGAGTCCGA-GA-ACGAGCTTGTTGGGGATGTAGCCGATGGAGATCT 761153 Query 31194 TGCCGAAGATCGGCGCGAGGTGATGCTCGCAATGTGAGTAGATGGGGATGTCGCGCACCG 31253 |||| || ||| | | ||| |||||||| | ||||||| | ||||||||||| Sbjct 761154 TGCCCGTGAAGGGCACCATGTGGTGCTCGCACAGCGAGTAGACGTCAATGTCGCGCACGA 761213 Query 31254 TCACCATCTGGTCATGCTTCTCCGCA 31279 | ||||||| ||| || | ||||||| Sbjct 761214 TGACCATCTCGTCGTGGTCCTCCGCA 761239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187289564414976