Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apiotrichum_20brassicae_20[genbank_20GCA_5F001600295.1_202016-03-01]
16 sequences; 23,647,732 total letters
Query= NC_031058.1
Length=58566
Score E
Sequences producing significant alignments: (Bits) Value
seq5 105 3e-18
>seq5
Length=1777877
Score = 105 bits (116), Expect = 3e-18
Identities = 149/206 (72%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 31076 GCGATCTGGTCTGTGAGCCGTTCCTGCACTTGCAGGCGGCGAGCATACATGTCCGCCAGG 31135
|||| ||| | ||||| || ||||| || ||||||||||||| | || | || || |
Sbjct 761036 GCGACCTGCTTGGTGAGGCGCTCCTGGACCTGCAGGCGGCGAGAAAACGTCTCGGCAATA 761095
Query 31136 CGGGACAGCTTGCTCAGGCCCACGATACGACC--GTTCGGAATGTAGCTGATCGTGACCG 31193
|| | |||||||| || || | || |||| | ||| || ||||||| ||| | || |
Sbjct 761096 CGCGCGAGCTTGCTGAGTCCGA-GA-ACGAGCTTGTTGGGGATGTAGCCGATGGAGATCT 761153
Query 31194 TGCCGAAGATCGGCGCGAGGTGATGCTCGCAATGTGAGTAGATGGGGATGTCGCGCACCG 31253
|||| || ||| | | ||| |||||||| | ||||||| | |||||||||||
Sbjct 761154 TGCCCGTGAAGGGCACCATGTGGTGCTCGCACAGCGAGTAGACGTCAATGTCGCGCACGA 761213
Query 31254 TCACCATCTGGTCATGCTTCTCCGCA 31279
| ||||||| ||| || | |||||||
Sbjct 761214 TGACCATCTCGTCGTGGTCCTCCGCA 761239
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 187289564414976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |