Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20domesticum_20[genbank_20GCA_5F001599015.1_202016-03- 01] 28 sequences; 24,510,922 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 8e-14 >seq1 Length=4014173 Score = 93.3 bits (102), Expect = 8e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 94392 ACCTTTGCCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTC 94451 ||| ||||| ||| ||| || |||| ||||| | || ||||| || || ||||| Sbjct 2026438 ACCCTTGCCCTCACGCTCGTACTTCTGGTACAGGGTCTCAAACTTCTCCGAGTGAACGTC 2026497 Query 94452 GGAAAGGCCAGGGCACTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTTCACTCT 94511 || ||| |||||||||||| ||||||||| |||| ||| | | |||| || | Sbjct 2026498 GGCAAGACCAGGGCACTCGGCGGGGCACATGAGGGTCCAGTCACCGTCGGCCTCGACACG 2026557 Query 94512 CTCCATGAAGAGATCAGATACCCAGATAGCTGGGAAAAGATCCCTCGTCCTCAAATCTTC 94571 || ||||||||| |||| ||||||| ||| ||| ||||| | || | | || || Sbjct 2026558 CTTCATGAAGAGGTCAGGGACCCAGAGAGCGTAGAACAGATCACGCGCGCGAACCTCCTC 2026617 Query 94572 ATTACCGGCATTCTTTCTGCAGTCAATAAAGTCCTTCACGTCCAGATGCCA 94622 || ||| ||||| | | ||||| ||||| || ||| |||||| Sbjct 2026618 CTTGCCGTGGTTCTTGCGGAGGTCAAGGAAGTCGAAAACATCCGCATGCCA 2026668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583644986740