Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20domesticum_20[genbank_20GCA_5F001599015.1_202016-03- 01] 28 sequences; 24,510,922 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq7 105 6e-18 >seq7 Length=1643429 Score = 105 bits (116), Expect = 6e-18 Identities = 188/272 (69%), Gaps = 2/272 (1%) Strand=Plus/Plus Query 21237 AGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAA 21296 ||||||||||| || || ||| |||| | | ||||||| | |||| |||||||| ||| Sbjct 674477 AGCTGGTCCACTCCTTGGCCCGCGTAATCGTCGTCGGCAGTCTTGTATTCCGCCCCGAAA 674536 Query 21297 TGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCCCCGAAGCCC 21356 || | ||||||||| || ||||| ||||| || || ||||| || || | ||| || || Sbjct 674537 TGGCGCCACTGGAAACCATACACGGGCCCGAGGTCCCCCTCCCGCCGATGACCG-AGGCC 674595 Query 21357 TGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGCCGCGGCGCGA 21415 ||| | | | | | ||||| ||||| ||||||| || | ||||| | Sbjct 674596 GACGCGGTCGAGATACTCGCGGCTCCCGTTGCCGTCCCAGATATGCACGCCCTTTTCCTG 674655 Query 21416 CAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCCTCCACGACGCCCCT 21475 ||| | | ||| ||| | || |||| |||||| || | |||||| | |||||| | Sbjct 674656 CAGCTTGCGCCCGTCCGTGCAACCGCTGACAAACCAGAGGAGCTCCTCAATGACGCCACG 674715 Query 21476 CCAAAACACCCTTTTGGTGGTTAACAGAGGAA 21507 |||||| | ||||| || | || |||| Sbjct 674716 GGTAAACACGCGCTTGGTCGTAAGGAGGGGAA 674747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427775854021440